Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F002196585.1_202017-06-16] 1,359 sequences; 49,118,876 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq472 143 3e-29 >seq472 Length=3275154 Score = 143 bits (158), Expect = 3e-29 Identities = 324/482 (67%), Gaps = 9/482 (2%) Strand=Plus/Minus Query 159304 CAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA--ATCCAAGCATACC 159361 || || ||| | || |||||||||||| ||| || || | || ||| | || |||| Sbjct 744336 CAGCCCAACTCTGGTGCACAGGGTGAGTTTGCTGGTCT--TCGCTGTATCAAGGCTTACC 744279 Query 159362 ATCAAGGATCAGGA-GATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGA 159420 | | ||| || || | ||||| |||| || || | || || | || || || || Sbjct 744278 A-CGAGGCTCGTGATGGAGATAAGCGAAAGGTCTGCCTTATCCCTGTTTCGGCTCACGGT 744220 Query 159421 ACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT 159480 || || ||||| || || | ||||| || ||||| ||||| |||||||||||| | | Sbjct 744219 ACCAACCCTGCTTCTGCTGCCATGGCTGGTATGAAGGTTGTTACTGTCAAGTGTGACGGT 744160 Query 159481 GA---TGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGAA 159537 | ||||||| | || ||| | ||||| || || ||| | | | |||| Sbjct 744159 AAGACTGGCAACCTGGATATCGAGGATCTGAAGGCCAAGTGTGTCAAGCACGCTGATGAA 744100 Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || | ||| ||| |||| ||||| ||||| ||||| || || | | |||| Sbjct 744099 CTTGCTGCTATCATGGTTACCTATCCCTCTACTTTCGGTGTCTTCGAGCCTGAGATCAAG 744040 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 || | ||| | |||| || ||| |||| |||| || || | || ||||| || | Sbjct 744039 CAAGTCTGTGATCTTGTCCACGAGCATGGCGGTCTCGTCTACATGGACGGTGCCAACATG 743980 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || ||| | ||||| | || ||||| |||||| ||||| || ||||| ||| Sbjct 743979 AACGCCCAGATCGGTCTTTGCAGCCCCGGTGACATTGGTGCTGATGTTTGCCATCTCAAC 743920 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 | || ||||| ||||||||||| || || || || ||||| || || || ||||| | | Sbjct 743919 CTCCACAAGACCTTCTGTATTCCCCACGGCGGCGGTGGTCCCGGTGTTGGCCCTATCGCT 743860 Query 159778 GT 159779 || Sbjct 743859 GT 743858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588041210480240