Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F002196585.1_202017-06-16] 1,359 sequences; 49,118,876 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq472 136 5e-27 >seq472 Length=3275154 Score = 136 bits (150), Expect = 5e-27 Identities = 341/513 (66%), Gaps = 9/513 (2%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || || ||||| || || || || ||||||||||| ||||| || Sbjct 743858 ACAGCGATAGGGCCAACACCGGGACCACCGCCGCCGTGGGGAATACAGAAGGTCTTGTGG 743917 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 743918 AGGTTGAGATGGCAAACATCAGCACCAATGTCACCGGGGCTGCAAAGACCGATCTGGGCG 743977 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 743978 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACAAGATCACAGACT 744037 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 744038 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAGGTAACCATGATAGCAGCA 744097 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479 |||||| | | | ||| || || ||||| | ||| || | ||||||| Sbjct 744098 AGTTCATCAGCGTGCTTGACACACTTGGCCTTCAGATCCTCGATATCCAGGTTGCCAGTC 744157 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| || Sbjct 744158 TTACCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGGTTG 744217 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCCTTG 138598 || || || || || | || || || || || |||| ||||| | || || ||| | Sbjct 744218 GTACCGTGAGCCGAAACAGGGATAAGGCAGACCTTTCGCTTATCTCCATCACGAGCCTCG 744277 Query 138599 ATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGT 138656 || || || | ||| || | || || ||| |||||||||||| || | ||| || Sbjct 744278 -TGGTAAGCCTTGATACAGCGA--AGACCAGCAAACTCACCCTGTGCACCAGAGTTGGGC 744334 Query 138657 TGTAATGATATAGAATCAAAACCTGTGATATCA 138689 || | | ||| || | ||| ||||| ||| Sbjct 744335 TGAAGAGTGGTAGCGTCCATACCAGTGATCTCA 744367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578988564264680