Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F002196585.1_202017-06-16] 1,359 sequences; 49,118,876 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq694 205 1e-47 seq948 125 9e-24 seq483 82.4 9e-11 >seq694 Length=1559318 Score = 205 bits (226), Expect = 1e-47 Identities = 1138/1783 (64%), Gaps = 55/1783 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || | | || || || || || || || || Sbjct 751511 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGT 751452 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTC 75328 ||||||||||||| || ||||||| || | | |||| || || | || || ||| Sbjct 751451 CTTGGAGACATACAACCTGATGTCC--AGCAAATTCTTCACACATGCCTCTCCCACGCTC 751394 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||| || || || || || || |||| ||||||| | | | | ||||| Sbjct 751393 TTCAACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 751334 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 751333 GACAGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 751274 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506 || |||||||| || || | || | | | || | | ||| || ||| || | Sbjct 751273 GGTGGTATTGGCCTGAACGTGCACCGTATCCGTGCTACTGG--CTCCTACATCGCCGGTA 751216 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| ||| | ||| || |||| |||||||| || || ||| ||| || |||| Sbjct 751215 CCAACGGTACATCGAACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCT 751156 Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGG 75622 |||| | || | | ||| | || | ||| | | || ||||| | || || ||| Sbjct 751155 ATGTCGACCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGG 751097 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | ||| || | ||||||||||| | || ||||| ||| | || |||| || | Sbjct 751096 CACTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGG-TCCG 751038 Query 75683 TGTA-GAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || || |||| || ||| ||||| || || |||||||||||||| ||||| Sbjct 751037 TGCCCGTGACCT--TTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAA 750980 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || || | ||| | || | || || || || || || ||| ||||| Sbjct 750979 AAGAACGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 750920 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCG 75856 || |||||||| || || || ||| |||||| || ||||||| | | ||| | Sbjct 750919 GGAGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGCAA---G 750863 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 ||| | | || | | || ||||| | || ||||| | | ||||| ||||| |||| Sbjct 750862 ACTAT-CAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAA 750804 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 |||| ||||| ||||||||||| || ||| ||||| ||||||||||| | || || Sbjct 750803 CCCATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGTAC 750744 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||| ||||| || || ||||| |||||| | |||||| | || ||| || Sbjct 750743 CATCCGAAGCTCCAACCTGTGCACTGAAATTATTGAGTACTGTGCCCCTGACGAGGTCGC 750684 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAAT---GAAGAGACTCGCAC 76092 ||| ||||| | || || | || || || | |||| || ||| || || Sbjct 750683 TGTCTGCAACCTTGCCTCTCTGGCTCTGCCCTCTTTCATCAACTACGATGAGGCTTGC-- 750626 Query 76093 TTTTGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | || | | || || || || | ||| || |||||| || || ||| Sbjct 750625 -TACGACT-TCAAGAAGTTGCACAAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGA 750568 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| || || || || || || || || || ||| ||||| ||| ||| Sbjct 750567 TCATCGATGTGAACCACTACCCTGTCCAGGAGGCTCGCAACAGTAACATGCGCCACCGAC 750508 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGCCGCTACGCATTT 76270 | |||||| | |||||||| || || || |||| || || | ||| | | | || Sbjct 750507 CCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCTTTCCTTGCTCTGCGCATGCCC-TTC 750449 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || ||| || || ||| | || | ||||| || ||||| || ||||| || Sbjct 750448 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATTTACCACGCTGCC 750389 Query 76331 CTGGAGGCGAGTTGTGAAT-TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 || || ||| | ||||| | | | ||| |||| || || | ||||| Sbjct 750388 CTCACTGCCTCC-GTGCAGCTGGCTAAGGAGGAGGGTCCCTACTCCACCTTCAAAGGTTC 750330 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA 76449 ||||| || | || | || ||||| || |||||| || || || || || | || Sbjct 750329 CCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGG-AACGTCAAGCCCT-CTGACCTC 750272 Query 76450 CG--ACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | ||||||| | ||| ||||| ||||| | || | ||||||||||| Sbjct 750271 TGGGACTGGGAGACTCTTCGAGAGGAAG---TCAAGACACACGGCATCCGTAACAGTCTG 750215 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 | | || || ||||| || ||| ||| | || || |||| || || || ||||| Sbjct 750214 CTCCTTGCTCCTATGCCTACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTC 750155 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 || || ||||| | |||||||||| || | ||||| |||||||| ||||| Sbjct 750154 GAGCCCTACACCTCCAACATCTACCAACGACGTGTTCTCGCTGGTGAGTTCCAGGTTGTC 750095 Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 76684 ||| || |||| ||||| | || ||||| |||||| | | ||||||| | Sbjct 750094 AACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAAC 750035 Query 76685 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAG 76744 | ||| | | | |||||||||||| || || | | ||||| | ||| ||||| Sbjct 750034 CGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAG 749975 Query 76745 AATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGAT 76804 ||| || || || ||||| ||| | | ||| || | ||||| || ||| Sbjct 749974 GCTCTGTATAAGACCGTTTGGGAGATCTCTCAGCGCCAAGTCGTTCAGATGGCTGCTGAT 749915 Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 76862 || ||| ||||||||||| |||| ||| |||| | |||| | || |||| Sbjct 749914 CGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGA 749857 Query 76863 TGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921 || |||| || | |||||| | || | || ||||| | || ||||| || || ||| Sbjct 749856 TGGGCAAGATCACCAGTATGCACTTTGCAGGC-TGGAAGCTTGGCCTCAAGACTGGCATG 749798 Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 ||||| || || || |||| || || |||||||||| Sbjct 749797 TACTACCTTCGTACACAGGCTGCTGCTGCTCCTATTCAGTTCA 749755 >seq948 Length=183984 Score = 125 bits (138), Expect = 9e-24 Identities = 334/504 (66%), Gaps = 20/504 (4%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | | || | ||| |||||| ||| |||| Sbjct 70459 AAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 70401 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| || || ||| ||||||||||||||| || | ||| | |||| | Sbjct 70400 TCTCGTTGCTTTCGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTT 70341 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| ||||||||||| || || |||||| || || || || || || Sbjct 70340 CTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCG 70281 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258 ||||||||||| ||| || |||||| || ||| || | || | || | | Sbjct 70280 TGATGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTCTCACCTCAAGGGTCG 70224 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| | | | ||||| | ||| | | || || || |||||| | | ||| Sbjct 70223 TGCCAGCAAGCAGATGATCCAGGATATCATTACTGATGCCGTCACCATTGAGCAGGAGTT 70164 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | || || || || || || || |||| ||||||||||| ||| |||| Sbjct 70163 CCTCACTGAGGCTCTTCCCTGCGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTA 70104 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTG-GGGTGCCACCCA-----TTTG 65432 |||||||| || | ||||||||||| || | | || || | | ||| Sbjct 70103 CATTGAGTTCGTCGCTGATCGTCTCCT------TGTCGCGCTTGGCAACGAGAAGGTTTA 70050 Query 65433 GAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTT 65492 || || | || || || ||||| ||||| ||||| ||| | ||| ||||||||||| Sbjct 70049 CAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTT 69990 Query 65493 CTTTGAGAAGCGAGTTGGGGACTA 65516 ||| |||||||| |||| ||||| Sbjct 69989 CTTCGAGAAGCGTGTTGCCGACTA 69966 >seq483 Length=683330 Score = 82.4 bits (90), Expect = 9e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || || | ||| ||||||||||| || Sbjct 76342 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 76283 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || |||||||| | ||| ||||| | || || |||| ||| || ||||| || || Sbjct 76282 ATGGTTGAAGAGCAGGACCTTGACCTGGCCGCGGTAATCGGCATCGATGACACCAGCGCC 76223 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||||||||| ||||| || |||| || |||| Sbjct 76222 TGTGTCAATGAAATGCTTGGAAGCGAGACCCGATCGAGGGGCAATGCGTCCAT 76170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596559465773920