Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20fujikuroi_20[genbank_20GCA_5F002196585.1_202017-06-16] 1,359 sequences; 49,118,876 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq449 96.9 3e-14 >seq449 Length=786022 Score = 96.9 bits (106), Expect = 3e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| || |||||| || |||| || |||||||| ||||||||||| | || |||||| Sbjct 452720 GGTAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCGGCACGT 452661 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||| | || || |||| | || || ||||| |||| || |||| Sbjct 452660 ACTGTCATTACTGGTGATGCCAACCTTTCTCTACACGAGGTCGGTGTCCCTCGCAGTATT 452601 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACA 432440 || | | || || | | ||||| ||| ||| Sbjct 452600 GCCAGGACCCTCACCTATCCCGAAACTGTGACA 452568 Score = 87.8 bits (96), Expect = 1e-11 Identities = 278/429 (65%), Gaps = 3/429 (1%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||| || ||||| ||| || || || |||| | || || | Sbjct 732062 ATTGGTAATGACAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACGGCGGAGACGTTCAT 732003 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGG 281499 ||||| |||||||| | ||| || ||||| ||||| || || || || | | ||||| Sbjct 732002 GATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACACCACGGGGGGCAGG 731943 Query 281500 TGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTC 281559 ||||| || | | || | |||| | || || || || ||| || || || Sbjct 731942 GGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTGGTGCGTTGACGCTC 731883 Query 281560 ACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT 281619 ||||||| | | |||||| ||| ||| || || || || | || | || || Sbjct 731882 ACCCTCGTAGACCTGGATAAGAACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACCTC 731823 Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 ||| || || || || || ||||| | || | |||||||| ||||||||||| Sbjct 731822 GGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATGAGCTTGGTCATCATACCACCAGC 731763 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| ||||| || || | ||||| | || | ||| | || | || || Sbjct 731762 GGTCTCGATACCGAGAGAGAGGGGCGCAACATCGAGAAGCAGAATCTCGTTGGTAGCCTT 731703 Query 281738 TCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 281796 | | || | ||| ||||| || || || | || ||||| || |||||||| || Sbjct 731702 GCTGGAGGTGTCACCGGAGAGAATCGCAGCCTGGACGGCGGCACCGTAGGCAACAGCCTC 731643 Query 281797 ATCAGGATT 281805 |||||| || Sbjct 731642 ATCAGGGTT 731634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740563678843134