Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 4e-21
>seq3
Length=8256178
Score = 116 bits (128), Expect = 4e-21
Identities = 203/295 (69%), Gaps = 3/295 (1%)
Strand=Plus/Plus
Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285
|||| | || || ||||||||||| ||| ||| |||||||||| |||||||||||
Sbjct 2157879 GGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCA 2157938
Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345
||||| || || || |||||||| || || | || || || || || |||||| |
Sbjct 2157939 TGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCT 2157998
Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405
| | ||||| || || |||||||||||| || ||||| || || | || || |
Sbjct 2157999 CAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGCGAAGAAAGCAAGAATGTGGGAGA 2158058
Query 17406 TGAAATATTTTTCGTCCGGTGTAA---GAACGCGCCAGTCCTTTAAATCTTTGGATATAT 17462
|||| |||| ||||| | || | | | |||||| | | ||| ||||| | ||
Sbjct 2158059 TGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCCAGTCGTGGAGATCCTTGGAGAGAT 2158118
Query 17463 CCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
| | || || | ||||| || ||| ||||||| || ||||| | ||| ||
Sbjct 2158119 CGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCTTCTTGTACATTTGCCAGAT 2158173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517544312605320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |