Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25] 199 sequences; 36,667,552 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=8256178 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || ||||| || || ||||| || ||||||| |||| || ||| Sbjct 6474459 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 6474518 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| ||||||||| |||| || || ||||| || || || || || || ||||| | Sbjct 6474519 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 6474578 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||||| | ||||||||||| ||| | |||||| Sbjct 6474579 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 6474638 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | || || ||||| || ||||| Sbjct 6474639 CCCGTGAGGGTCTTGACGAAAATCTGCAT 6474667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062766040800