Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3 279 8e-70
>seq3
Length=8256178
Score = 279 bits (308), Expect = 8e-70
Identities = 576/847 (68%), Gaps = 29/847 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||||||||| ||||| | || ||| |||||||
Sbjct 2158173 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 2158114
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | || |||||| | |||| | | || || ||
Sbjct 2158113 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 2158054
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
|||||| | || ||||| || | |||||| || |||||||| || ||||| ||||| ||
Sbjct 2158053 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAG-CG 2157995
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
|||| ||| | || || |||| ||| ||||| || || ||||| |||||||
Sbjct 2157994 ATTCAGCGGCGAGGTCCAGATCCCCGAGGC-TCGATGCTTCTATGGTTTCCAGATCATGA 2157936
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG- 125315
| |||||| | ||||| |||| ||||| || || || | ||||| || ||
Sbjct 2157935 TGGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTG 2157876
Query 125316 --CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
|| |||| | || ||||| ||||| | ||||| | || | || || || ||||
Sbjct 2157875 CCCAGCGTACATAC---CTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGG 2157819
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
| | |||| || || |||||| | || | || ||| | | ||| | | || || |
Sbjct 2157818 CGGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTCGCTCAGCGTCTTGTTG 2157759
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
| || || ||||| ||||| |||||||| ||| ||||| ||||||| |||||||
Sbjct 2157758 CTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCA 2157699
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
||||||| || |||||||| || |||| ||||||| | || ||||| |||||||
Sbjct 2157698 AGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGACGAGG 2157639
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613
| || ||| ||||||||| ||| || | ||| | | | | || | |
Sbjct 2157638 GTCTTCACACCGACTTTGCCTGTCTCCT------CCACTCT---CACCTCAAGGGACGTG 2157588
Query 125614 CCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673
||||| | | | | || ||||| | ||||||||||| || || || |||||||
Sbjct 2157587 CCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 2157528
Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733
| || || | || || | || | |||||||||| ||| || ||| ||||||
Sbjct 2157527 TTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACA 2157468
Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGC--CG-CAAGATTTACAA 125788
| || || || || |||||||| || |||| | ||| || ||| | |||||
Sbjct 2157467 TCGAATTCGTCGCTGATCGTCTCCT-----CGTTGCTCTCGGCAACGAGAAGGTGTACAA 2157413
Query 125789 CGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848
||| || || || || |||||| | ||| || || | || ||||||||||| ||
Sbjct 2157412 GTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTT 2157353
Query 125849 CGAGAAG 125855
|||||||
Sbjct 2157352 CGAGAAG 2157346
Score = 114 bits (126), Expect = 2e-20
Identities = 321/488 (66%), Gaps = 10/488 (2%)
Strand=Plus/Plus
Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923
|| |||||| ||||| || || || || || || || | ||| ||||| | |||||
Sbjct 1368985 CGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCA 1369044
Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983
|||||||| ||||| || || || | || | || || || || || ||||
Sbjct 1369045 TGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTC 1369104
Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043
|| || | ||| |||| | || || ||| | || ||| | ||||||||||| ||| |
Sbjct 1369105 CGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAG 1369164
Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103
||| | |||| || |||||||| || | || || || | || ||||
Sbjct 1369165 AGAAACGGCGAATGGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTAC 1369224
Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163
|| || || |||||||| |||| |||||| |||||| || | | | |
Sbjct 1369225 GGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGG----TAAGGGTCGCAA 1369280
Query 97164 GTCGATGCACG---AGAA-CTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAA 97218
||| || | | |||| || ||| | ||||| | ||| ||| ||| |||||| ||||
Sbjct 1369281 GTCTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGA-GGCCCAGACAGAGACCGGAA 1369339
Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278
|| | ||| |||||||||||| | |||||||| || |||||| || | || |
Sbjct 1369340 ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTA 1369399
Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338
||||| ||||||| |||||||| || || | || ||| | | || || ||| |
Sbjct 1369400 CCATCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCG 1369459
Query 97339 CAGTTTGC 97346
| ||||||
Sbjct 1369460 CTGTTTGC 1369467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057356615240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |