Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 4e-18
seq2 104 4e-18
>seq3
Length=8256178
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| | | ||||| |||||||| || ||||||||||| |||||
Sbjct 2433941 GCCAAGCGTCACCGAAAGATTT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 2433883
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 2433882 TCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 2433842
>seq2
Length=8791613
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||||| | ||||| |||||||| || ||||| ||||| || ||
Sbjct 7309234 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACAAAGCCCGCCAT 7309176
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 7309175 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 7309135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075018052907
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |