Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3 383 4e-101
>seq3
Length=8256178
Score = 383 bits (424), Expect = 4e-101
Identities = 1146/1739 (66%), Gaps = 42/1739 (2%)
Strand=Plus/Plus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|||| ||| ||||||||||||||| | ||||| || ||| |||| ||| | |||
Sbjct 1368622 ATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGAT 1368681
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559
|||| | | || ||||| || || | | | || || | ||||| || || |
Sbjct 1368682 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCAA 1368739
Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619
|| || | | ||| || || |||| | || ||| | || || ||||| ||| |
Sbjct 1368740 GCCCCACTTTATTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTG 1368799
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679
| |||||||| || ||| || ||||||| || || || |||| |||||| | ||||
Sbjct 1368800 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTT 1368859
Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737
|||||| || || || ||||| | | || |||| | ||||| || | | |||
Sbjct 1368860 CCAAGATGGCTGGTGGTATTGGCTTGAACGC-CCACCGAATCCGTGCCACTGG-CTCTTA 1368917
Query 363738 CATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| ||| || || |||| | || || | ||||||||||| |||||||| |||
Sbjct 1368918 CATCGCCGGTACCAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACA 1368976
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856
| ||||| | ||||| ||||||||||| ||||| || || || || || || |
Sbjct 1368977 ACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACC 1369036
Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAA 363915
| || || || ||||| | || ||||| ||||| ||||| || || ||||| ||
Sbjct 1369037 TTGAACCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAG- 1369095
Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975
||||| | || || ||||| ||||||| || |||||| | |||| | ||| ||||||
Sbjct 1369096 GAGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAG 1369155
Query 363976 CGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
|| || ||| | | |||| || | ||| | ||||| ||||||| || || ||| |
Sbjct 1369156 CGTGTCGAGAGAAACGGCGAAT-GGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGC 1369214
Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094
|| | |||||||| | || ||||| ||||||||||| || ||||| ||||
Sbjct 1369215 TGACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGGG 1369274
Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154
||| ||| | || || ||||| || |||| ||||| | || | |||| |||||
Sbjct 1369275 TCGCAAGTCTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACAGAGAC 1369334
Query 364155 AGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
|||| ||||| | ||| | ||||| ||| ||||| |||||| ||||| || |||
Sbjct 1369335 CGGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACC 1369393
Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
||||||| | || | || |||||| || || ||||| ||||||||| ||| || ||
Sbjct 1369394 TTGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGAT 1369452
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGAT 364326
||| || || || |||||||| || | | || || | ||| | | |||||
Sbjct 1369453 GAGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTTATCAACTATGAAGAT 1369512
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGAC 364386
| | | ||| | || | || | || || || | || | ||||| | ||
Sbjct 1369513 GCTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAAC 1369572
Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGC 364441
||| | |||||| || | || || | | || || || ||| || ||||
Sbjct 1369573 AAGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AACATGC 1369627
Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGA 364501
|||| || || |||||||||||||| || || |||||||| | ||| | ||| |
Sbjct 1369628 GTCACCGACCCATTGGTCTTGGTGTGCAAGGTCTCGCTGATGCCTTTCTTGCCCTCCGCA 1369687
Query 364502 TGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATT 364561
|| | ||||| || ||||| ||||||| || || ||| | ||||| || || || ||
Sbjct 1369688 TGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACC 1369747
Query 364562 TTGCCGCAATGACTGCTTC-GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTAT 364620
|| || | ||| | || ||| | | | ||| | || || ||||| || |
Sbjct 1369748 ACGCTGCCCTTACTACGTCTGTGCAACTCGCCAAGGAGGAA-GGTCCCTACTCCACCTTC 1369806
Query 364621 GAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCT 364680
|||| |||||| || |||| | ||||||| || | |||||||||| ||| |||
Sbjct 1369807 AAGGGCTCCCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCT 1369866
Query 364681 GTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--T 364738
| || ||| ||||||| | || || | || |||| || |||| |||||| |
Sbjct 1369867 GACCTTTGGGACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGT 1369926
Query 364739 C-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAG 364797
| |||||| || || ||||| || || ||| | ||||| || || ||||||||
Sbjct 1369927 CTGCTCGTT---GCTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAA 1369983
Query 364798 TGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCG 364857
||||| || || | || ||| | || |||||| || ||| | || || || | |
Sbjct 1369984 TGCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAG 1370043
Query 364858 GTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATG 364917
|| || || | || ||||||||||| |||| || || ||| || |||
Sbjct 1370044 GTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATG 1370103
Query 364918 AAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGAT 364977
|||||| ||||| || | ||| |||||| | |||||||| || | || | ||
Sbjct 1370104 AAGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAG 1370163
Query 364978 CTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCG 365037
| ||| || | ||||| || || ||||| ||||| |||| | | | |||||
Sbjct 1370164 ATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCT 1370223
Query 365038 GCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCA 365097
|| || || ||||| || || |||| ||||| | ||| | ||||| | ||
Sbjct 1370224 GCTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACCCT 1370283
Query 365098 ACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||| | |||| | || |||||| ||| || ||||| |||||| ||||| ||
Sbjct 1370284 ACCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTGG 1370342
Score = 98.7 bits (108), Expect = 3e-15
Identities = 310/468 (66%), Gaps = 23/468 (5%)
Strand=Plus/Minus
Query 22190 ACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTT 22249
|||| ||| | || ||| | ||||| || ||||| ||| || | ||||| || ||
Sbjct 2158073 ACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCA 2158014
Query 22250 TTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTC 22308
||||||||| || || ||| || | || | || ||| ||||| |||| |||
Sbjct 2158013 ATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATGCTTC 2157955
Query 22309 TATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAG 22368
|||||| | || || ||||| || || | ||| | |||||||| || || |
Sbjct 2157954 TATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCC------CTCC-- 2157903
Query 22369 TCACTCG-TAGA-AGATAAAG-AC---GAACAACGAA---ACTTATTCCGCGCGATTCGC 22419
||| ||| || | || ||| || | || || | || | ||| ||| || |
Sbjct 2157902 TCA-TCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGAC 2157844
Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAAC 22477
|| |||| | || || ||||| |||||||| | |||||| | || ||||
Sbjct 2157843 ACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAAC 2157784
Query 22478 GTT-CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536
| | ||||| | |||||| |||| ||||||| ||||| || || ||||| ||
Sbjct 2157783 TCTACCTTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 2157724
Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596
|| ||| | | ||||| ||||| || || |||| | ||||| ||||| | |||||
Sbjct 2157723 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCT 2157664
Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644
|| ||| | ||| || || ||||||||||| ||||| ||||| |||
Sbjct 2157663 AACGAGCTCATTTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGT 2157616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350276855618
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