Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25] 199 sequences; 36,667,552 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 9e-16 seq1 86.0 5e-12 >seq2 Length=8791613 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | || ||| |||| |||||| | | Sbjct 2570102 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 2570043 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| || ||||| ||||| ||||| Sbjct 2570042 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAG 2569983 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||||| || ||||||||| ||||| |||| | | | | || ||| || ||| Sbjct 2569982 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 2569923 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 2569922 ATCCAGAAGGAGTCGAC 2569906 >seq1 Length=11267849 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| |||||| | ||||||||||| | ||||| ||||| ||| Sbjct 6400693 ATCACCCTCGAGGTCGAGTCTTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 6400752 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || ||||| ||| || |||| | || ||||||||| ||||| ||| Sbjct 6400753 AAGGAGGGCATCCCCCCGGATCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGAT 6400812 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| | || ||| || ||||| || || Sbjct 6400813 GGCCGAACCCTCTCCGACTACAACATCCAGAA 6400844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934957270845