Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq3 313 5e-80
>seq3
Length=8256178
Score = 313 bits (346), Expect = 5e-80
Identities = 593/862 (69%), Gaps = 32/862 (4%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || |||| |||||| || |||||||| || ||
Sbjct 2158173 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 2158114
Query 42360 GCCAAGGACACGGCCGGCTGG-------GAGTCACTGTCTGAGAACGAAAAGTTTTTCCT 42412
||||||| || |||| || | ||| | ||| ||| | | ||| |
Sbjct 2158113 TCCAAGGATCTCCACGACTGGAACAACCGATTGACT---TCAGA-CGAGCAATACTTCAT 2158058
Query 42413 CAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCAC 42472
| |||| || || |||||||| ||||| |||||||| ||||||||||| || |
Sbjct 2158057 CTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGA 2157998
Query 42473 CAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGC 42532
| |||| ||||| ||| | ||||| || |||||||| || ||||||||
Sbjct 2157997 GCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCAT 2157938
Query 42533 CATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592
|| |||||| | ||||| || ||| || || || | || |||||| ||| ||
Sbjct 2157937 GATGGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCC 2157878
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| | |||||| || ||||| ||| | || || || || |||||| ||||||||
Sbjct 2157877 TGCCCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 2157818
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712
||| ||||| || |||||| || | || | || |||| || | || || ||
Sbjct 2157817 GGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTCGCTCAGCGTCTTGTTGC 2157758
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
||| | ||||| ||||| ||||||||| || ||||| || |||||||||||||||||
Sbjct 2157757 TTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAA 2157698
Query 42773 GCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| || || || ||||| || || | ||| || ||||| ||||| | |||||||
Sbjct 2157697 GAAGCGTGGCCTC-ATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGACGAGG 2157639
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCG 42890
| || || | ||||||||||| ||||| ||| |||||| ||| || ||| |
Sbjct 2157638 GTCTTCACACCGACTTTGCCTGTCTCCTCCACTC---TCACCTCAAGGGACGTGCCAGC- 2157583
Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950
|| || | ||| || ||| ||||| || ||||| || ||| ||||||| || ||
Sbjct 2157582 AAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTCTTACT 2157523
Query 42951 CAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009
|| | || ||| ||| ||||| ||||||||||| | |||||||| |||||||| |
Sbjct 2157522 GAGGCTCT-CCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATCGA 2157464
Query 43010 GTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACAC 43063
| |||||| || | |||||| | | |||| || || | ||||| |
Sbjct 2157463 ATTCGTCGCTGATCGTCTCCT------CGTTGCTCTCGGCAACGAGAAGGTGTACAAGTC 2157410
Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123
| ||| |||||||| |||||||||||||| | | |||||||||||||| |||||
Sbjct 2157409 CACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGA 2157350
Query 43124 GAAGCGCGTCGCCGACTACCAG 43145
||||||||| || |||||||||
Sbjct 2157349 GAAGCGCGTTGCTGACTACCAG 2157328
Score = 291 bits (322), Expect = 2e-73
Identities = 887/1362 (65%), Gaps = 49/1362 (4%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || ||||| ||||||| |||| | || ||
Sbjct 1370052 GTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGG 1369993
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||| | || || ||||||| || ||||||| || || || || ||||| || | ||
Sbjct 1369992 CTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAAC 1369933
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
||||||||||| | | ||||| ||| || || ||| | |||||||||
Sbjct 1369932 GAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCA 1369873
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| | | ||||| | | | || ||||||||| ||||| || | ||||
Sbjct 1369872 AAGGTC--AGAGGGCTTGACATT-------CCACATGTCGAACTGGAGAATACCCTCAGA 1369822
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCT 244388
| | ||| ||||| | |||| | ||||||||| || || ||| || | |||| |
Sbjct 1369821 GGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAGACGT 1369762
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448
|| ||||| |||| |||||||||||||||||| |||||||| || || ||||
Sbjct 1369761 AGTA-AGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCT--- 1369706
Query 244449 CGCAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCC 244503
|||| || |||| |||| | | ||| | || || || || ||||| ||
Sbjct 1369705 --CAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACC 1369648
Query 244504 GATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTT 244563
| || ||||||| ||| ||| ||||| | || || | || ||||| |||
Sbjct 1369647 AAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTT 1369588
Query 244564 GCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTG 244623
| ||||||| | |||||| | |||||| | | | ||| ||| |||| ||
Sbjct 1369587 GACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCTTCTT 1369528
Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683
|||||||| | | | ||| || || || | | ||| | || | |
Sbjct 1369527 GAAGTCGTA---GCAAGCATCTTC----ATAGT-----TGATAAAAGAGGGCAGAGACAA 1369480
Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
| ||| |||||||| || || ||||| || | | | ||| | | ||||| |||||
Sbjct 1369479 GGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCA 1369420
Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803
||||| || |||||| || |||| || || || |||| |||||| ||
Sbjct 1369419 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATC 1369360
Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863
||||||||||||||| || |||||||| |||||| | || | | || ||| ||
Sbjct 1369359 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAG 1369300
Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923
| | |||||||| | | ||||| |||| |||||| |||||| |||||| ||
Sbjct 1369299 TTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGC 1369240
Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983
||| || ||| || || || | ||||| ||||| |||||||||||| |
Sbjct 1369239 CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGT 1369180
Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043
||| |||||| || ||| | || |||||| || || |||||||| || || |||
Sbjct 1369179 CCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAA 1369120
Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAA 245102
||||| | | | ||| ||| || ||| ||||| | || || | || || |
Sbjct 1369119 CAGGTCACGAGCGCGGACCTCCTCCTTACC-GTGATTCTTTCGGAGATCAAGGAACTCGA 1369061
Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162
|||||||| ||||||| || || | ||||| |||| ||| || || |||||||| || |
Sbjct 1369060 AGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCAC 1369001
Query 245163 CCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCG 245218
|||||| || | | ||||| |||||| | ||||| | || || || |||
Sbjct 1369000 CCTGGT----CAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCG 1368945
Query 245219 TTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATG 245275
|| || || ||||| || |||||| | ||| || | | || ||| | | |
Sbjct 1368944 TTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTT- 1368886
Query 245276 GACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCT 245335
|| ||| | || || || |||||| || | ||| || |||||| ||| ||
Sbjct 1368885 --CAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAG 1368828
Query 245336 ATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG 245395
|| || || ||||||||| |||||| | | || ||||| || || ||||| ||||
Sbjct 1368827 ATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGT 1368768
Query 245396 GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
|| | | | |||||| | ||||||||| || || || |||
Sbjct 1368767 GGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAG 1368726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944336850956240
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