Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25] 199 sequences; 36,667,552 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 >seq3 Length=8256178 Score = 161 bits (178), Expect = 1e-34 Identities = 1076/1708 (63%), Gaps = 67/1708 (4%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 1370366 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 1370307 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 || || | |||| | || || | |||| | ||| | | || || ||| Sbjct 1370306 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 1370247 Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 113764 || |||||| ||||| || || ||||| | |||| ||| || || ||| Sbjct 1370246 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 1370190 Query 113765 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAG 113824 |||||||| |||| || ||| || || | ||||| | ||| || ||||| || Sbjct 1370189 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 1370130 Query 113825 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 113881 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 1370129 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 1370073 Query 113882 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 113938 ||||||| |||| || |||||||| ||||| || || ||| || | Sbjct 1370072 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 1370016 Query 113939 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTG 113998 | ||||| |||| ||||| ||||||||||| || ||||| || | || || | ||| Sbjct 1370015 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 1369956 Query 113999 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 114058 ||| || ||||| || || | ||| || ||||| |||| ||| | | | | Sbjct 1369955 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 1369896 Query 114059 TCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 114116 || ||||| |||||||| | | | || | || | | |||||| || |||| Sbjct 1369895 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 1369838 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 |||| ||||| | ||||| || || |||| || || ||| || || || ||| | Sbjct 1369837 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 1369778 Query 114177 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 | | || | || || ||||| ||||| || || ||||| || || | ||| Sbjct 1369777 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 1369719 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | | ||||| || ||||| | | ||| || ||| |||| |||||| Sbjct 1369718 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 1369659 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 114355 ||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 1369658 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 1369599 Query 114356 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 114415 || || || ||||| | | | || | ||| | ||||| | |||| || Sbjct 1369598 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 1369539 Query 114416 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 114472 || ||||| | | | || | || || ||||||| ||| | | || || | Sbjct 1369538 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGAC 1369482 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 | || || || || || |||| | |||||| | ||| || || || || || Sbjct 1369481 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 1369422 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACG 114590 |||| || || || ||||| || | ||||||||| || ||| ||| | || || Sbjct 1369421 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAGT 1369364 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 ||||||||| |||||| | || | || ||||| || |||| || ||||| || | || Sbjct 1369363 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 1369304 Query 114651 AGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTT 114703 | | | | | | || | | | ||| || |||| |||| |||||||||| Sbjct 1369303 AAAGTTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTACTTT 1369251 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GG 114762 ||| || || ||||| || ||||| | || | || || || || || | || Sbjct 1369250 TCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGG 1369192 Query 114763 GCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCA 114822 ||| | ||||| ||||| || ||| |||||||||||||| || || |||||||| Sbjct 1369191 GCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCA 1369132 Query 114823 GAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 114882 |||||| |||| || || ||| ||| | || || | || ||||| || | || Sbjct 1369131 AAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATC 1369072 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 | || || | || || |||||||| ||||| ||||| | |||| | || | | Sbjct 1369071 AAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACC---AGG 1369015 Query 114943 ACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGG 114996 || |||| |||||| || || | || ||| || || || || ||||| || Sbjct 1369014 TCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGG 1368955 Query 114997 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACA 115054 || |||||| | || ||||| || || ||| || ||| | | |||| | || Sbjct 1368954 AACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATT 1368897 Query 115055 TCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 115114 ||| || || |||||||| || ||| ||| || || || || | |||| Sbjct 1368896 CGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGG 1368837 Query 115115 CTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATT 115174 | ||||||| || || || ||| |||| | | | ||||||||| || | Sbjct 1368836 GTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGC 1368777 Query 115175 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG- 115233 || ||| ||| ||||| |||||||| | || || | || || ||| | | |||| Sbjct 1368776 TGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGC 1368719 Query 115234 -GGACATCTTATCGTAGGTCTCCAAGAC 115260 ||||| | ||| ||||||||||| Sbjct 1368718 TTGACATGAGGTTGTATGTCTCCAAGAC 1368691 Score = 147 bits (162), Expect = 3e-30 Identities = 534/821 (65%), Gaps = 31/821 (4%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 2157331 GTAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 2157390 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 125871 || || || ||||| | || || | | | |||| | | ||| ||| Sbjct 2157391 GAAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAG 2157444 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 ||||||||| | |||| | || ||||||| ||| | |||||||| |||| || Sbjct 2157445 GAGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAG 2157504 Query 125932 GTTACATGGGAGCGCGTCC--AAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACG 125989 | ||| ||||| || || |||| ||| ||| |||||| ||||| || | Sbjct 2157505 GGCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATA 2157562 Query 125990 ATGGCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG 126046 ||| | || || | | | || ||| ||| | || | || ||| || | Sbjct 2157563 ATGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-G 2157619 Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| |||||||||||||| || ||||| || || || |||| ||| || Sbjct 2157620 GCAAAGTCGGTGTGAAGACCCTCGTCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCA 2157679 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||| | |||||| || | | ||| | ||| ||||||||| Sbjct 2157680 GGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATA 2157739 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGCGACTTTGTGTCAAA 126225 ||||| || || || |||| ||||||| ||| |||| || | ||| | | Sbjct 2157740 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAG-TTCTTATCCTGGAT 2157798 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| || ||||| | |||||| || ||| || || | || | | || | || Sbjct 2157799 CCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTTGAA 2157858 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 ||| | | | | || || |||||||| |||| ||||| || |||||||| Sbjct 2157859 GAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATGTTTC 2157918 Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404 | ||||| | | ||| || | ||| | | ||||| | || || ||| |||| Sbjct 2157919 GGAGTGGATGTTCTCCATCAT-GATCTGGAAACCATAGAAGCATCGAGCCTCGGGGATCT 2157977 Query 126405 GTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463 | ||||| | || ||| | | | | ||||||| || || || ||||| |||| Sbjct 2157978 GGACCTC-GCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGCG 2158036 Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520 || || || || || | ||||| | || || | ||| || | |||||| Sbjct 2158037 AAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCCAG 2158096 Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||| |||||||| |||||||| | |||||| || ||||| Sbjct 2158097 TCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCA 2158137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352114082920