Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25] 199 sequences; 36,667,552 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2 105 7e-18 >seq2 Length=8791613 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | ||||| || || || ||||||||||| | Sbjct 2570103 ACCGCCACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGA 2570162 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || |||||||||||||| |||| | |||||||| || ||||| Sbjct 2570163 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGG 2570222 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | |||||| | || || Sbjct 2570223 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTATCAGATGACTCAAC 2570282 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||||| || || ||||| || ||||| Sbjct 2570283 CTCGAGGGTAATAGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 2570330 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || ||||| || || |||||||| || | || ||| || |||| Sbjct 2569608 AAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTC 2569667 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||||||||| |||| | |||||||| || ||||| || || || || || Sbjct 2569668 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTC 2569727 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || | || || || | || | ||| Sbjct 2569728 CTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGATGGT 2569787 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 |||||||||||| || || |||| Sbjct 2569788 CTTGCCGGTCAAGGTCTTGACGA 2569810 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || |||||| | || || |||||||||||| Sbjct 2569906 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 2569965 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | |||||||| || ||||| || || || || || || || || ||| Sbjct 2569966 GCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC 2570025 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | || | ||||||||| || | || Sbjct 2570026 ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 2570085 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 2570086 TTGACGAAGATTTGCAT 2570102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643557133560