Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-16
>seq1
Length=11267849
Score = 104 bits (114), Expect = 2e-16
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
||||| ||||||||| | |||| || |||||||| || ||||||||| | |||||||||
Sbjct 2954285 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 2954344
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974
|| || |||||| |||| |||| || | ||| |||| || ||||| |||| || ||
Sbjct 2954345 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCATGAGGTCGGTGTGCCTCGTAGCATC 2954404
Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006
|| || ||||||| | ||| | ||| ||
Sbjct 2954405 GCCCGAACCCTTACTTATCCCGAGACTGTCAC 2954436
Score = 93.3 bits (102), Expect = 3e-13
Identities = 216/326 (66%), Gaps = 0/326 (0%)
Strand=Plus/Plus
Query 517979 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCA 518038
|||| |||| |||||| || | ||| | | || ||||| || || |||||||||
Sbjct 2681760 TTATGCTTTCGCTTGAACTCGTTAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTCA 2681819
Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 518098
|| ||||| | ||| | || | |||| | || | ||| | || || |||| |
Sbjct 2681820 CCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTA 2681879
Query 518099 AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 518158
| |||| ||||| ||| |||||||| | ||| || || || || || ||
Sbjct 2681880 AGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACCC 2681939
Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218
|| || || |||||||| || |||| || ||||| || || || || || ||||
Sbjct 2681940 TCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATTCGG 2681999
Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278
| ||| || ||||| || || || ||||| || || || || | || || |||||
Sbjct 2682000 AGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTGAGAGTCGTTG 2682059
Query 518279 AAATATGCAGGAACAGTAATAACGGC 518304
|| || ||||| || || | ||||||
Sbjct 2682060 AAGTAGGCAGGGACGGTGACAACGGC 2682085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780812524964494
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |