Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 5e-14
>seq2
Length=8791613
Score = 93.3 bits (102), Expect = 5e-14
Identities = 260/394 (66%), Gaps = 5/394 (1%)
Strand=Plus/Plus
Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246
|||||||||| || ||||| || ||||| || || ||||||||||| ||||| || | |
Sbjct 1121268 CAATAGGACCGACACCAGGGCCACCACCACCGTGGGGAATACAGAAGGTCTTGTGGAGGT 1121327
Query 138247 TTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTT 138305
| ||||| || ||||| || || ||| |||| || ||||| | ||| || ||
Sbjct 1121328 TAAGATGGCAGACATCAGCGCCGATA-TCACCAGGAGAGCAAAGACCGATCTGGGCGTTC 1121386
Query 138306 AGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGT 138365
| || ||||| || | || || ||||||| | || ||||| | | || | ||
Sbjct 1121387 ATGTTGGCACCGTCCATGTAGACGAGACCACCGTGCTCGTGAACAAGATCGCAGACTTGC 1121446
Query 138366 CTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGT 138425
| || | | ||||| |||||| || || || || |||| ||| ||| | |||
Sbjct 1121447 TTAATCTCGGGCTCAAAGACACCAAAGGTGGAGGGGTAGGTAACCATGATAGCAGCGAGC 1121506
Query 138426 TCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-TCAT- 138483
||| | | | ||| || || ||||| | ||||| | ||| ||| || |
Sbjct 1121507 TCATCAGCGTGCTTGACACACTTGGCCTTGAGATCCTCAATGTCCAGGTTACCAGTCTTG 1121566
Query 138484 -CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTT 138542
| ||||||||||| || || ||||| || ||||| | || ||||| || ||
Sbjct 1121567 CCGTCACACTTGACGGTGACGACCTTCATGCCAGCCATAGCGGCCGAGGCAGGGTTGGTA 1121626
Query 138543 CCATGTGCTGACTCTGGTATCAGACATACATTTC 138576
|| || || || | || ||||| || || ||||
Sbjct 1121627 CCGTGGGCAGAAACGGGGATCAGGCAAACCTTTC 1121660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578996959741480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |