Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq3 214 2e-50
>seq3
Length=8256178
Score = 214 bits (236), Expect = 2e-50
Identities = 1043/1637 (64%), Gaps = 43/1637 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| | ||| ||||||| ||||| | || ||| || || || ||||| |||
Sbjct 1368633 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGT 1368692
Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
||||||||||||| || ||||| |||| | | ||| ||| |||| || || |
Sbjct 1368693 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCAAGCCCCACTTTA 1368750
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||| || ||||| ||| || ||| | || ||||||||| | | | ||||||
Sbjct 1368751 TTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAG 1368810
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | |||||||| | || || | | ||||| || || ||| ||||
Sbjct 1368811 GACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCT 1368870
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| |||||||| || || ||| | | |||| | ||| || || ||
Sbjct 1368871 GGTGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACC 1368930
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|||||| || | ||||| |||| ||||| || || || ||| ||| || || ||
Sbjct 1368931 AATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTAC 1368990
Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGG 75622
|| | || ||| || |||| | || || |||| ||||| | |||||||||
Sbjct 1368991 GTTGACCA---GGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGG 1369047
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| ||||| || | ||||||||||| | ||| || || ||| | || |||| ||
Sbjct 1369048 CACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGC 1369107
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| | || || || | | | || ||||| || || |||||||||||||| || |||
Sbjct 1369108 GCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGA 1369167
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
|| ||||| |||| | || || || || || || || || | ||| ||
Sbjct 1369168 AACGGCGAATGGACTCTCATGTGCCCTAACGAATGC-CCTGGCCTTGCTGACTGCTACGG 1369226
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGT-AGAGCCAATGCGACT 75859
||| || ||||| || || ||| |||||| || ||| |||||| || | | || | |
Sbjct 1369227 TGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGA-GAGGGTAAGGGTC---GCAAGT 1369282
Query 75860 GTA-CCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917
|| | || | | | | ||||| | || ||||| | | ||||| ||||| |||| |
Sbjct 1369283 CTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACC 1369342
Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977
| | ||||| ||||||||| || || ||||||||||||||||| | || || |
Sbjct 1369343 CTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTACCA 1369402
Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037
|| ||||| || || ||||| || || | || ||| | |||||| ||||
Sbjct 1369403 TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTG 1369462
Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTT 76094
||||||| | || || | | || || | | ||| ||||||| || || |
Sbjct 1369463 TTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTTATCAACTATGAAGATGCTTGC---T 1369519
Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
|| | | || || || || |||| | ||||| | ||| | ||| |||
Sbjct 1369520 ACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCA 1369579
Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214
| ||| || || || || | || || || || ||||| ||| |||| |
Sbjct 1369580 TCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 1369639
Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274
||||| | ||||| ||||||||||| |||| ||| || |||| | ||||| |
Sbjct 1369640 TTGGTCTTGGTGTGCAAGGTCTCGCTGATGCCTTTCTTGCCCTCCGCATGCCCTTTGAGT 1369699
Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334
| ||| || ||| |||| | ||||| || ||||| || ||||| ||||
Sbjct 1369700 CTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTA 1369759
Query 76335 AGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393
|| |||| || | || | | ||||| |||| || || |||| || ||
Sbjct 1369760 CTACG-TCTGTGCAACTCGCCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCT 1369818
Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACG 76451
|| || | || | || ||||| || |||| |||| || || || || | | | |
Sbjct 1369819 GCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTCAAGCC-CTCTGACCTTTGGG 1369876
Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511
||||||| ||| || ||||| | ||| | || |||||||| | | |
Sbjct 1369877 ACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 1369936
Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571
| || ||||| || ||| ||| | || || | || || || ||||||||||| || |
Sbjct 1369937 CTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTT 1369996
Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631
|||| | |||||||||| | || ||| || || ||||| ||||||||
Sbjct 1369997 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCT 1370056
Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA--- 76688
|| |||| || || | || ||||| |||||| | | ||||||| | | ||
Sbjct 1370057 GGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCA 1370116
Query 76689 -TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747
|| ||| | | ||||| || || || ||| | | ||||| | || |||||| |
Sbjct 1370117 TTGCTGATAAC----GGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCT 1370172
Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807
|| ||| || |||||||| || | | | || | | ||||| || || |||
Sbjct 1370173 CTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTGCTGACCGT 1370232
Query 76808 GGTCGCTTCATTGATCA 76824
||| ||||||||||||
Sbjct 1370233 GGTGCCTTCATTGATCA 1370249
Score = 104 bits (114), Expect = 3e-17
Identities = 304/460 (66%), Gaps = 24/460 (5%)
Strand=Plus/Minus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
||||||| |||| ||| |||| ||||| || ||||||||||||||| ||| | |
Sbjct 2157779 CCTTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCT 2157720
Query 65129 TCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187
| ||| | || | ||| | |||||||| || |||||||| || || |||| || ||
Sbjct 2157719 T-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAAC 2157661
Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247
|| || ||||| || || |||||||| ||| || |||||| || ||| || | ||
Sbjct 2157660 GAGCTCATTTCTCGTGACGAGGGTCTTCACACCGACTTTGCC-TG--TCTCCTCCACTCT 2157604
Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304
| || ||| ||| | | | ||||| | ||| | | || || |||
Sbjct 2157603 CACCTCAAGGGACGTGCCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCT 2157544
Query 65305 ATTGAGAAAGGGTTCATCTT--GGACGCACTCCCATGTAATCTCATCGGTATGAACTCTG 65362
|||||| | | ||| |||| || || ||||| ||| || |||| ||||||||
Sbjct 2157543 ATTGAGCAGGAGTT--TCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCA 2157486
Query 65363 AGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-G 65421
| ||| ||||||| || | || | |||||||||||| |||| | |
Sbjct 2157485 ACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTC------GTTGCTCTCG 2157432
Query 65422 CCACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTG 65476
|| | | | | || | | || || || ||||| ||||| ||||| |||||
Sbjct 2157431 GCAACGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTG 2157372
Query 65477 ATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|| |||||||||||||| |||||||| |||| |||||
Sbjct 2157371 GCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCTGACTA 2157332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568116033120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |