Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25] 199 sequences; 36,667,552 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 2e-13 >seq1 Length=11267849 Score = 93.3 bits (102), Expect = 2e-13 Identities = 123/169 (73%), Gaps = 5/169 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||||||||| ||||| || |||||||||||| |||||| Sbjct 8504802 CTCAATCAAATGGGCAATTGTCATACGAGACGGAATAGCGTGAGGGTTGATGATAATGTC 8504743 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 ||| ||| || | | ||||||||||||| || | | | | ||| || Sbjct 8504742 AGGAGTCAGACC---CTCTCTGCTGAAAGGCATATCCTCCTGTCGATAGGTAACACCGAT 8504686 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAATGATTGGG 309852 || ||||||||| |||| | || || |||||||||||||| ||||| Sbjct 8504685 TGTACCCTTTTGACCGTGACGAGAGGCGAACTTGTCACCAAT--TTGGG 8504639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951969423075272