Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25] 199 sequences; 36,667,552 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3 111 5e-19 >seq3 Length=8256178 Score = 111 bits (122), Expect = 5e-19 Identities = 129/173 (75%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| |||| || || |||||||||| || || || | || || ||||| ||| Sbjct 2157778 CTTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTT 2157719 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || |||||||||||| | || |||||||| || |||| ||||||| |||| ||||| Sbjct 2157718 T-GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACG 2157660 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 | || || ||| ||||||||| | || |||||| |||||||| ||| || Sbjct 2157659 AGCTCATTTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGTCTCCTCCAC 2157607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588331950239555