Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25] 199 sequences; 36,667,552 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 174 2e-38 >seq3 Length=8256178 Score = 174 bits (192), Expect = 2e-38 Identities = 1075/1703 (63%), Gaps = 57/1703 (3%) Strand=Plus/Minus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 1370366 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 1370307 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | |||| | ||| || | |||| | ||| | | || || ||| Sbjct 1370306 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 1370247 Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 118004 || |||||| || || || || ||||| | |||| ||| || || ||| Sbjct 1370246 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 1370190 Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064 ||||||||| |||| || ||| || || | ||||| | ||| || ||||| || Sbjct 1370189 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 1370130 Query 118065 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 1370129 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 1370073 Query 118122 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 118178 ||||||| |||| || |||||||| ||||| || || ||| || | Sbjct 1370072 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 1370016 Query 118179 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTG 118238 | ||||| |||| ||||| ||||||||||| || ||||| || | || || | || Sbjct 1370015 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 1369956 Query 118239 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 118298 ||| || ||||| || || | ||| || ||||| |||| ||| | | | | Sbjct 1369955 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 1369896 Query 118299 TCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356 || ||| | |||||||| | | | || | || | | |||||| || |||| Sbjct 1369895 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 1369838 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 |||| ||||| | || || || || |||| || || || || || || ||| | Sbjct 1369837 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 1369778 Query 118417 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 | | || | || || ||||| ||||| || || || || || || | ||| Sbjct 1369777 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 1369719 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||||| || ||||| | | ||| || ||| |||| |||||| Sbjct 1369718 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 1369659 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595 ||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 1369658 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 1369599 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 || || || ||||| | | | || | ||| | ||||| | |||| || Sbjct 1369598 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 1369539 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 118712 || ||||| | | | || | || || ||||||| ||| | | || || | Sbjct 1369538 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGAC 1369482 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 | || || || || || |||| | |||||| | ||| || || || || ||| Sbjct 1369481 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 1369422 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACG 118830 |||| ||| || || ||||| || | ||||||||| || ||| ||| | || || Sbjct 1369421 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAGT 1369364 Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 118890 ||||||||| |||||| | || | || ||||| || |||| || ||||| || | || Sbjct 1369363 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 1369304 Query 118891 AGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 | | | ||| || | | | ||| | || |||| |||||||||| ||| Sbjct 1369303 AAAGTTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCT--CTCGTACTTTTCGTA 1369246 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GGGCAGA 119007 || || ||||| || ||||| | || | || || || || || | ||||| | Sbjct 1369245 CAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACA 1369187 Query 119008 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067 ||||| ||||| || ||| || ||||||||||| || || |||||||| || | Sbjct 1369186 TGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAG 1369127 Query 119068 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127 | |||| || || ||| ||| | || || | || ||||| || | || | | Sbjct 1369126 CTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGA 1369067 Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185 | || | || || |||||||| ||||| ||||| | |||| | || | | || Sbjct 1369066 ACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACC---AGGTCGCT 1369010 Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 |||| |||||| || || | |||||| ||| || ||||| ||||| |||| || Sbjct 1369009 TGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGA 1368950 Query 119242 TACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTG 119299 |||| | ||| ||||| || || ||| || ||| | | |||| | || ||| Sbjct 1368949 TACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATTCGGTG 1368892 Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359 | || || |||||||| || ||| ||| || || || || | |||| | | Sbjct 1368891 GGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATC 1368832 Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419 |||||| ||||| || ||| |||| | | | |||||||| || | ||||| Sbjct 1368831 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 1368772 Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGAC 119477 | || ||||| |||||||| | ||| || | || || ||| | | |||| ||| Sbjct 1368771 CTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGAC 1368714 Query 119478 ATCTTGTCGTAGGTCTCCAAGAC 119500 || || ||| ||||||||||| Sbjct 1368713 ATGAGGTTGTATGTCTCCAAGAC 1368691 Score = 152 bits (168), Expect = 6e-32 Identities = 533/817 (65%), Gaps = 25/817 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||| ||||||||||||||||| ||||| ||| | | | ||| |||||||| Sbjct 2157332 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 2157391 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | || || | | | || | || | ||||||||| Sbjct 2157392 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTG-CCGAGAGCAACGAGGAGACG 2157450 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| | || ||||||| ||| | ||||||||| |||| ||| ||| Sbjct 2157451 ATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGCACA 2157510 Query 129907 TGGGAGCGCGTCC--AAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964 ||||| || || |||| ||| ||| |||||| || || || | ||| | Sbjct 2157511 AGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAATGTCC 2157568 Query 129965 TGAATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 130021 || || ||| ||| || ||| ||| | || | || ||| || |||||| Sbjct 2157569 TGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GGCAAAG 2157625 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 || ||| |||||||||||||| || ||||| || || || |||| |||||| |||||| Sbjct 2157626 TCGGTGTGAAGACCCTCGTCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAGGCATG 2157685 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 || || |||||||| | |||||| || | | ||| | || ||||||||| ||||| Sbjct 2157686 AGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCA 2157745 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCAC 130198 || || || |||| ||||||| ||| |||| || || |||| | ||| Sbjct 2157746 ACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGG---TAGAGTTCTTATCCTGGATCCAT 2157802 Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 130258 || ||||| | |||||| || ||| || || | || | | || | ||||| Sbjct 2157803 CGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTTGAAGAGG 2157862 Query 130259 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCA 130318 | | | | || || |||||||| |||| ||||| || ||||||||| Sbjct 2157863 TATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATGTTTCGGAG 2157922 Query 130319 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 130377 |||| | | ||| || | ||| | | ||||| | || || ||| ||||| || Sbjct 2157923 TGGATGTTCTCCATCAT-GATCTGGAAACCATAGAAGCATCGAGCCTCGGGGATCTGGAC 2157981 Query 130378 CTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 130436 ||| | || ||| | | | | ||||||| || || || ||||| |||| || | Sbjct 2157982 CTC-GCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGCGAAGA 2158040 Query 130437 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 130493 | || || || | ||||| | || || | ||| || | |||||||||| Sbjct 2158041 AAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCCAGTCGT 2158100 Query 130494 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| |||||||| | |||||| || ||||| Sbjct 2158101 GGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCA 2158137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433661642440