Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25]
199 sequences; 36,667,552 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3 174 2e-38
>seq3
Length=8256178
Score = 174 bits (192), Expect = 2e-38
Identities = 1075/1703 (63%), Gaps = 57/1703 (3%)
Strand=Plus/Minus
Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 1370366 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 1370307
Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947
|| || | |||| | ||| || | |||| | ||| | | || || |||
Sbjct 1370306 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 1370247
Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 118004
|| |||||| || || || || ||||| | |||| ||| || || |||
Sbjct 1370246 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 1370190
Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064
||||||||| |||| || ||| || || | ||||| | ||| || ||||| ||
Sbjct 1370189 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 1370130
Query 118065 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 1370129 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 1370073
Query 118122 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 118178
||||||| |||| || |||||||| ||||| || || ||| || |
Sbjct 1370072 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 1370016
Query 118179 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTG 118238
| ||||| |||| ||||| ||||||||||| || ||||| || | || || | ||
Sbjct 1370015 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 1369956
Query 118239 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 118298
||| || ||||| || || | ||| || ||||| |||| ||| | | | |
Sbjct 1369955 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 1369896
Query 118299 TCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356
|| ||| | |||||||| | | | || | || | | |||||| || ||||
Sbjct 1369895 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 1369838
Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416
|||| ||||| | || || || || |||| || || || || || || ||| |
Sbjct 1369837 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 1369778
Query 118417 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475
| | || | || || ||||| ||||| || || || || || || | |||
Sbjct 1369777 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 1369719
Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535
| | ||||| || ||||| | | ||| || ||| |||| ||||||
Sbjct 1369718 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 1369659
Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595
||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 1369658 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 1369599
Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655
|| || || ||||| | | | || | ||| | ||||| | |||| ||
Sbjct 1369598 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 1369539
Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 118712
|| ||||| | | | || | || || ||||||| ||| | | || || |
Sbjct 1369538 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGAC 1369482
Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772
| || || || || || |||| | |||||| | ||| || || || || |||
Sbjct 1369481 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 1369422
Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACG 118830
|||| ||| || || ||||| || | ||||||||| || ||| ||| | || ||
Sbjct 1369421 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAGT 1369364
Query 118831 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 118890
||||||||| |||||| | || | || ||||| || |||| || ||||| || | ||
Sbjct 1369363 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 1369304
Query 118891 AGACATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
| | | ||| || | | | ||| | || |||| |||||||||| |||
Sbjct 1369303 AAAGTTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCT--CTCGTACTTTTCGTA 1369246
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GGGCAGA 119007
|| || ||||| || ||||| | || | || || || || || | ||||| |
Sbjct 1369245 CAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACA 1369187
Query 119008 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067
||||| ||||| || ||| || ||||||||||| || || |||||||| || |
Sbjct 1369186 TGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAG 1369127
Query 119068 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127
| |||| || || ||| ||| | || || | || ||||| || | || | |
Sbjct 1369126 CTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGA 1369067
Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 119185
| || | || || |||||||| ||||| ||||| | |||| | || | | ||
Sbjct 1369066 ACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACC---AGGTCGCT 1369010
Query 119186 ----ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241
|||| |||||| || || | |||||| ||| || ||||| ||||| |||| ||
Sbjct 1369009 TGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGA 1368950
Query 119242 TACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTG 119299
|||| | ||| ||||| || || ||| || ||| | | |||| | || |||
Sbjct 1368949 TACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATTCGGTG 1368892
Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359
| || || |||||||| || ||| ||| || || || || | |||| | |
Sbjct 1368891 GGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATC 1368832
Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419
|||||| ||||| || ||| |||| | | | |||||||| || | |||||
Sbjct 1368831 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 1368772
Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGAC 119477
| || ||||| |||||||| | ||| || | || || ||| | | |||| |||
Sbjct 1368771 CTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGAC 1368714
Query 119478 ATCTTGTCGTAGGTCTCCAAGAC 119500
|| || ||| |||||||||||
Sbjct 1368713 ATGAGGTTGTATGTCTCCAAGAC 1368691
Score = 152 bits (168), Expect = 6e-32
Identities = 533/817 (65%), Gaps = 25/817 (3%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| |||| ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 2157332 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 2157391
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | || || | | | || | || | |||||||||
Sbjct 2157392 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTG-CCGAGAGCAACGAGGAGACG 2157450
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | |||| | || ||||||| ||| | ||||||||| |||| ||| |||
Sbjct 2157451 ATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGCACA 2157510
Query 129907 TGGGAGCGCGTCC--AAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964
||||| || || |||| ||| ||| |||||| || || || | ||| |
Sbjct 2157511 AGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAATGTCC 2157568
Query 129965 TGAATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 130021
|| || ||| ||| || ||| ||| | || | || ||| || ||||||
Sbjct 2157569 TGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GGCAAAG 2157625
Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081
|| ||| |||||||||||||| || ||||| || || || |||| |||||| ||||||
Sbjct 2157626 TCGGTGTGAAGACCCTCGTCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAGGCATG 2157685
Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141
|| || |||||||| | |||||| || | | ||| | || ||||||||| |||||
Sbjct 2157686 AGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCA 2157745
Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCAC 130198
|| || || |||| ||||||| ||| |||| || || |||| | |||
Sbjct 2157746 ACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGG---TAGAGTTCTTATCCTGGATCCAT 2157802
Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 130258
|| ||||| | |||||| || ||| || || | || | | || | |||||
Sbjct 2157803 CGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTTGAAGAGG 2157862
Query 130259 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCA 130318
| | | | || || |||||||| |||| ||||| || |||||||||
Sbjct 2157863 TATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATGTTTCGGAG 2157922
Query 130319 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 130377
|||| | | ||| || | ||| | | ||||| | || || ||| ||||| ||
Sbjct 2157923 TGGATGTTCTCCATCAT-GATCTGGAAACCATAGAAGCATCGAGCCTCGGGGATCTGGAC 2157981
Query 130378 CTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 130436
||| | || ||| | | | | ||||||| || || || ||||| |||| || |
Sbjct 2157982 CTC-GCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGCGAAGA 2158040
Query 130437 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 130493
| || || || | ||||| | || || | ||| || | ||||||||||
Sbjct 2158041 AAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCCAGTCGT 2158100
Query 130494 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||||| |||||||| | |||||| || |||||
Sbjct 2158101 GGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCA 2158137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433661642440
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