Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000599445.1_202014-03-25] 199 sequences; 36,667,552 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 6e-13 >seq1 Length=11267849 Score = 89.7 bits (98), Expect = 6e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 161555 TACATTCTTGACGCAGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGTCGTGCAGGC 161614 || || || || | ||||||||| ||| | || || || |||| ||||| || Sbjct 11054481 TATATCCTGGATGAAGCTGAGGAGTAGGGCATTGAAATACCATATTCGTTCCGTGCCGGG 11054540 Query 161615 GCTTGTTCGTCGTGCGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 161674 |||||||| | ||||| || | | | ||||| || | ||| || ||| |||||||||| Sbjct 11054541 GCTTGTTCCGCCTGCGCCGGGATATTGGTCTCAGGGAGCGTCGATCAAGGCGACCAGTCT 11054600 Query 161675 TTCCTGGACGATGACCAAATCGATTCTG--GTTTCATTCTGACTTGTGTTTCTTATCCCA 161732 ||||||| || |||| || | | | || | |||||| ||||| | ||||||| Sbjct 11054601 CTCCTGGATGACAACCAGATTGGC-CGGAAGTAT-ATTCTGCTGTGTGTCGCCTATCCCA 11054658 Query 161733 CGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 161769 ||||||| || || | |||||| | || ||||| || Sbjct 11054659 CGAGCGACTGCGTCAGTGAGACCAACAAGGAAGACGA 11054695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557653012834680