Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq109 257 1e-63 seq193 140 3e-28 >seq109 Length=515286 Score = 257 bits (284), Expect = 1e-63 Identities = 621/936 (66%), Gaps = 8/936 (1%) Strand=Plus/Minus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 |||||||| ||||| || || ||||| || || ||| || | || || || || Sbjct 356697 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCAC 356638 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 || ||| | || || || | || | ||||| || || |||||||| |||| Sbjct 356637 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCC 356578 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || ||||| ||| | ||| | || || ||| | Sbjct 356577 TTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGT 356518 Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | | | | | || ||| || ||| ||||||||||| ||||| || Sbjct 356517 TTCTGAGCCTTGATA-GACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGC 356459 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 ||||||||| ||||||| ||||| || ||||| || ||| | || ||||||||| | Sbjct 356458 CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGT 356399 Query 23326 CCACATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382 ||| | | | ||| || || || |||| |||||||| || ||||| ||||| | Sbjct 356398 CCA---TTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAA 356342 Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442 |||||| || || ||||| |||||||| || ||| |||||| | ||| | || || Sbjct 356341 GAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTC 356282 Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502 || ||||| || ||||| || || ||||| | ||| || || || |||| ||| || || Sbjct 356281 GAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACC 356222 Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562 ||||| || |||||||| || ||||||||| |||| | ||||| || |||| |||||| Sbjct 356221 ACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTT 356162 Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622 ||| | || || || | || || | || || | ||| ||| || Sbjct 356161 GGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAA 356102 Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682 || || || || || || || ||||| || || || || || |||||||| || Sbjct 356101 GCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACC 356042 Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742 || ||||||||||| || | | || | ||| || || || | || | | || || Sbjct 356041 ATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGT 355982 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802 | |||| ||| | || ||||| || || || ||| | | ||||| || ||||| Sbjct 355981 ACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTA 355922 Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862 || || | | | ||||| || || || || || | ||||| ||||| ||||| Sbjct 355921 TGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 355862 Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922 | || || | ||| | | ||||| ||| | | || ||||| | || || Sbjct 355861 ATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGACAAGGT 355802 Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958 | || |||||||||| ||||| ||||| ||||| Sbjct 355801 TCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATC 355766 Score = 105 bits (116), Expect = 6e-18 Identities = 224/331 (68%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 22241 TTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAA--TG 22298 |||| |||||| |||||| || || || || || || || ||||| | | ||| || Sbjct 357483 TTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCA-CAACCTG 357425 Query 22299 TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATT 22358 | ||| || || ||||| || ||||||||||| | ||||||| || || Sbjct 357424 T-CGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGG 357366 Query 22359 CGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACA 22418 ||| |||||| || ||||||| ||||| || || || | |||| ||| | Sbjct 357365 GGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAA 357306 Query 22419 AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACA 22478 ||| ||| || | ||| |||| || |||| || || || |||||||| | | Sbjct 357305 GACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAA 357246 Query 22479 AGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTA 22538 ||| ||||||||||| |||||||| ||| | || || || |||| ||||| || || | Sbjct 357245 GGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAA 357186 Query 22539 TCTGAGCGGTCGAAGCGGTCGGCATCGGCGC 22569 |||| | ||| ||||| ||||| || || Sbjct 357185 TCTGCGAGGTACTGGCGGTAGGCATAGGAGC 357155 >seq193 Length=35663 Score = 140 bits (154), Expect = 3e-28 Identities = 454/701 (65%), Gaps = 37/701 (5%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| |||||||| || || || ||||| | || || | || || Sbjct 4658 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 4599 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAAT--TTTATTAA 57685 || |||||||| ||| ||| | || | || | | || ||| ||| || || Sbjct 4598 TCCAAGGATCTCCACGACTGGAACAACCG-ATTGACTTCAGACGAGCAATACTTCATCTC 4540 Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745 ||| | | || || ||||| || ||||| || || || || |||||| | || || | Sbjct 4539 CCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCG 4480 Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 ||| || || || | | ||||| ||||||| || || || || | || Sbjct 4479 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 4420 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 || ||| | || || |||| || || || ||||||||||| ||| | |||||| | Sbjct 4419 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 4360 Query 57866 CGAGAAACGTAGA---CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922 | || |||| | || |||||||| | || || || || ||| |||||||| Sbjct 4359 CCAG---CGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 4303 Query 57923 AGAGTGGTCAATCAAATGGAT----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978 || ||| | ||| |||||| | ||| | | || ||||| || | || Sbjct 4302 GGATTGGGCCATCCGATGGATCCAGGATAAG----AACTCTACCTTCGCTCAGCGTCTTG 4247 Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038 | || || || ||||| || ||||| ||||| || |||||| | || || ||| Sbjct 4246 TTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGC 4187 Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098 | ||||| || ||||| ||||| || |||| ||| |||||| | || || || || | Sbjct 4186 TCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATG 4127 Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT---------TGTCAATA 58149 ||||||| || || || ||||| || || | |||||||| | || || | Sbjct 4126 AGGGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCACCTCAAGGGACGTGCCAGCA 4067 Query 58150 AACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGT 58209 ||| || | ||| ||||||||||||||| || || | || || | |||| Sbjct 4066 AACAGATG---------ATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGT 4016 Query 58210 TTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAAC 58250 || | || || || || || ||| ||||||| |||||| Sbjct 4015 TTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAAC 3975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761557862480