Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq109 257 1e-63
seq193 140 3e-28
>seq109
Length=515286
Score = 257 bits (284), Expect = 1e-63
Identities = 621/936 (66%), Gaps = 8/936 (1%)
Strand=Plus/Minus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|||||||| ||||| || || ||||| || || ||| || | || || || ||
Sbjct 356697 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCAC 356638
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
|| ||| | || || || | || | ||||| || || |||||||| ||||
Sbjct 356637 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCC 356578
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|||||||||||| | || | || ||||| ||| | ||| | || || ||| |
Sbjct 356577 TTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGT 356518
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265
||||||| | | | | | || ||| || ||| ||||||||||| ||||| ||
Sbjct 356517 TTCTGAGCCTTGATA-GACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGC 356459
Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325
||||||||| ||||||| ||||| || ||||| || ||| | || ||||||||| |
Sbjct 356458 CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGT 356399
Query 23326 CCACATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382
||| | | | ||| || || || |||| |||||||| || ||||| ||||| |
Sbjct 356398 CCA---TTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAA 356342
Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442
|||||| || || ||||| |||||||| || ||| |||||| | ||| | || ||
Sbjct 356341 GAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTC 356282
Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502
|| ||||| || ||||| || || ||||| | ||| || || || |||| ||| || ||
Sbjct 356281 GAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACC 356222
Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562
||||| || |||||||| || ||||||||| |||| | ||||| || |||| ||||||
Sbjct 356221 ACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTT 356162
Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622
||| | || || || | || || | || || | ||| ||| ||
Sbjct 356161 GGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAA 356102
Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682
|| || || || || || || ||||| || || || || || |||||||| ||
Sbjct 356101 GCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACC 356042
Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742
|| ||||||||||| || | | || | ||| || || || | || | | || ||
Sbjct 356041 ATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGT 355982
Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802
| |||| ||| | || ||||| || || || ||| | | ||||| || |||||
Sbjct 355981 ACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTA 355922
Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862
|| || | | | ||||| || || || || || | ||||| ||||| |||||
Sbjct 355921 TGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 355862
Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922
| || || | ||| | | ||||| ||| | | || ||||| | || ||
Sbjct 355861 ATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGACAAGGT 355802
Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958
| || |||||||||| ||||| ||||| |||||
Sbjct 355801 TCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATC 355766
Score = 105 bits (116), Expect = 6e-18
Identities = 224/331 (68%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 22241 TTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAA--TG 22298
|||| |||||| |||||| || || || || || || || ||||| | | ||| ||
Sbjct 357483 TTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCA-CAACCTG 357425
Query 22299 TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATT 22358
| ||| || || ||||| || ||||||||||| | ||||||| || ||
Sbjct 357424 T-CGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGG 357366
Query 22359 CGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACA 22418
||| |||||| || ||||||| ||||| || || || | |||| ||| |
Sbjct 357365 GGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAA 357306
Query 22419 AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACA 22478
||| ||| || | ||| |||| || |||| || || || |||||||| | |
Sbjct 357305 GACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAA 357246
Query 22479 AGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTA 22538
||| ||||||||||| |||||||| ||| | || || || |||| ||||| || || |
Sbjct 357245 GGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAA 357186
Query 22539 TCTGAGCGGTCGAAGCGGTCGGCATCGGCGC 22569
|||| | ||| ||||| ||||| || ||
Sbjct 357185 TCTGCGAGGTACTGGCGGTAGGCATAGGAGC 357155
>seq193
Length=35663
Score = 140 bits (154), Expect = 3e-28
Identities = 454/701 (65%), Gaps = 37/701 (5%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| |||||||| || || || ||||| | || || | || ||
Sbjct 4658 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 4599
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAAT--TTTATTAA 57685
|| |||||||| ||| ||| | || | || | | || ||| ||| || ||
Sbjct 4598 TCCAAGGATCTCCACGACTGGAACAACCG-ATTGACTTCAGACGAGCAATACTTCATCTC 4540
Query 57686 ACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAG 57745
||| | | || || ||||| || ||||| || || || || |||||| | || || |
Sbjct 4539 CCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCG 4480
Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805
||| || || || | | ||||| ||||||| || || || || | ||
Sbjct 4479 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGAT 4420
Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865
|| ||| | || || |||| || || || ||||||||||| ||| | |||||| |
Sbjct 4419 GGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTGC 4360
Query 57866 CGAGAAACGTAGA---CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922
| || |||| | || |||||||| | || || || || ||| ||||||||
Sbjct 4359 CCAG---CGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 4303
Query 57923 AGAGTGGTCAATCAAATGGAT----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAA 57978
|| ||| | ||| |||||| | ||| | | || ||||| || | ||
Sbjct 4302 GGATTGGGCCATCCGATGGATCCAGGATAAG----AACTCTACCTTCGCTCAGCGTCTTG 4247
Query 57979 TCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGA 58038
| || || || ||||| || ||||| ||||| || |||||| | || || |||
Sbjct 4246 TTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGC 4187
Query 58039 TGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACG 58098
| ||||| || ||||| ||||| || |||| ||| |||||| | || || || || |
Sbjct 4186 TCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATG 4127
Query 58099 AGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT---------TGTCAATA 58149
||||||| || || || ||||| || || | |||||||| | || || |
Sbjct 4126 AGGGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCACCTCAAGGGACGTGCCAGCA 4067
Query 58150 AACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGT 58209
||| || | ||| ||||||||||||||| || || | || || | ||||
Sbjct 4066 AACAGATG---------ATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGT 4016
Query 58210 TTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAAC 58250
|| | || || || || || ||| ||||||| ||||||
Sbjct 4015 TTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAAC 3975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445761557862480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |