Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq496 86.0 5e-12
seq199 84.2 2e-11
>seq496
Length=401694
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || || || || |||| || || || || | | || ||| |
Sbjct 192728 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGACACCAT 192787
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || || || ||||||||||| || || || ||||| || || |
Sbjct 192788 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGATT 192847
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || |||||||| ||| | |||||| ||| ||| ||||||| |||||||| || ||
Sbjct 192848 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAA 192907
>seq199
Length=44064
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 22312 GACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAG 22371
|||||||||||||| || || || || || || ||||| ||||| || || ||| | |||
Sbjct 8515 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAG 8456
Query 22372 GATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGT 22427
||| ||||||| | ||| |||||||| || || || |||||| | || || ||
Sbjct 8455 GATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGT 8400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419723554686985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |