Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq109 172 5e-38
>seq109
Length=515286
Score = 172 bits (190), Expect = 5e-38
Identities = 317/462 (69%), Gaps = 2/462 (0%)
Strand=Plus/Plus
Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATGACGAACAAGGC 93965
|||||||| || || || ||| ||| | || || || ||||| | ||| | ||||
Sbjct 355970 TTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGAT-ATGAAGGA 356028
Query 93966 CGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGC 94025
||| ||| || || | ||| | ||||||| ||||| | || || || ||
Sbjct 356029 GGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGC 356088
Query 94026 GGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTAC 94085
|| || || || | | | |||| | ||||||| || || |||||| ||||||
Sbjct 356089 TGGTGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTAC 356148
Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145
|||||| || |||||||| |||| || ||||| || || ||||||||| | || || ||
Sbjct 356149 CAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTA 356208
Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205
||| |||||||||||| | | | ||| | ||||| |||| || || || |||||
Sbjct 356209 CGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGGCA 356268
Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265
||| ||||| | ||| | || || |||||||| ||||| || || || | ||
Sbjct 356269 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGC 356328
Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325
| ||||| |||| ||||| ||| | || || ||||| ||||| || ||||||| |||
Sbjct 356329 TCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAA 356388
Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367
| || |||| ||| | || || || ||||| || || ||
Sbjct 356389 CGGCGAATGGACTCTCATGTGCCCTAACGAATGCCCTGGCCT 356430
Score = 125 bits (138), Expect = 7e-24
Identities = 260/384 (68%), Gaps = 10/384 (3%)
Strand=Plus/Plus
Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053
|||| ||| | ||||||||| | ||| ||| |||||||| | || | |||||||||
Sbjct 357045 AGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC 357104
Query 95054 CTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGC 95113
| || || | ||||| | | |||||| | ||| ||||| || || || ||||
Sbjct 357105 CCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGC 357164
Query 95114 CCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCA 95173
| || ||| || ||||||| |||||||||||||| | || || || | ||||||||
Sbjct 357165 CTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTTACACCTCCA 357224
Query 95174 ACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT-A 95232
|| | ||| | | || || || || || || |||| || ||||| || || |
Sbjct 357225 ACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCA 357284
Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC----AACTGCTACG 95288
|| | || || | ||||| | ||| || | ||||||| | ||||
Sbjct 357285 AGGATCTTGTCGAC-ATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCATTGCT--- 357340
Query 95289 CGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAA 95348
| ||||| || ||||||||||||| | || || | || |||||||| || |||||
Sbjct 357341 -GATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCTCTGTACAA 357399
Query 95349 GACCGTGTGGGAGATCCCGCAGCG 95372
||| ||||||||||| | |||||
Sbjct 357400 GACTGTGTGGGAGATTTCTCAGCG 357423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494717826069240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |