Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq109 138 1e-27
>seq109
Length=515286
Score = 138 bits (152), Expect = 1e-27
Identities = 1075/1711 (63%), Gaps = 71/1711 (4%)
Strand=Plus/Minus
Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 357585 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 357526
Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668
|| || | |||| | || || | |||| | ||| | | || || |||
Sbjct 357525 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 357466
Query 115669 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 115725
|| |||||| || || || || ||||| | |||| ||| || || |||
Sbjct 357465 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 357409
Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785
|||||||| |||| || ||| || || | ||||| | ||| || ||||||||
Sbjct 357408 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 357349
Query 115786 CC---ACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 357348 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 357292
Query 115843 AGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898
||||||| | | ||| | |||||||| ||||| || || ||| || |
Sbjct 357291 AGATCCTTGAGAAGCCAGGGG----TTGACAACCTGGAACTCGCCAGCAAGGACTCGGCG 357236
Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958
| |||||||||| ||||| ||||||||||| || ||||| || | || || | ||
Sbjct 357235 TTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGT 357176
Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCG 116018
||| || ||||| || || | ||| || |||||||||| ||| | | |
Sbjct 357175 ACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATC 357116
Query 116019 TTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAAC 116076
|| ||||| |||||||| | | | || | || | | |||||| || |||
Sbjct 357115 CTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAAC 357058
Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136
||||| ||||| | || || || || |||| || || || || || || |||
Sbjct 357057 TGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTG 356998
Query 116137 GCCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 116195
|| | || | || || ||||| ||||| || || ||||| || || | ||
Sbjct 356997 GCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 356939
Query 116196 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAG 116255
|| | ||||| || ||||| | | ||| || ||| |||| |||||
Sbjct 356938 CAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAG 356879
Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 116315
|||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 356878 ACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGAC 356819
Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 116375
|| || || ||||| | | | || | ||| | ||||| | |||| ||
Sbjct 356818 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTC 356759
Query 116376 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGC 116432
|| ||||| | | | || | || || ||||||| ||| | | || || |
Sbjct 356758 GTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGA 356702
Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492
| || || || || || |||| | |||||| | ||| || || || || ||
Sbjct 356701 CAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGT 356642
Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACAC 116550
|||| || || || ||||| || | ||||||||| || ||| ||| | || ||
Sbjct 356641 GCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAG 356584
Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610
||||||||||||||| | || | || ||||| || |||| || ||||| || | |
Sbjct 356583 TGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTAC 356524
Query 116611 CATACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTT 116663
|| | | | | | || | | | ||| || |||| |||| |||||||||
Sbjct 356523 CAAAGTTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTACTT 356471
Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCT- 116721
| ||| || |||||||| || ||||| ||| || | || || || || || |
Sbjct 356470 TTCGTACAGAGCCTCAAATTCGTCACCGT-AGCAGTCAGCAAGGCCAGG-GCATTCGTTA 356413
Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781
|| || | ||||| ||||| || ||| || ||||||||||| || || ||||||
Sbjct 356412 GGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATC 356353
Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841
|| || || |||| || || ||| ||| | || || | || ||||| || |
Sbjct 356352 CAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGA 356293
Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC----- 116895
|| | || || | || || |||||||| ||||| ||||| | |||| | ||
Sbjct 356292 TCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGT 356233
Query 116896 CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955
| |||| |||| |||||| || || | || || ||| || || || |||||
Sbjct 356232 CGCTTG---TTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATG 356176
Query 116956 GGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGA 117013
|||| |||||| | || ||||| || || ||| || ||| | |||| | ||
Sbjct 356175 GGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGA 356118
Query 117014 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073
|||| || || |||||||| || ||| ||| || || || || | |||
Sbjct 356117 TTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGA 356058
Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 117133
| | ||||||| ||||| || ||| |||| | | | |||||||| || |
Sbjct 356057 GGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAA 355998
Query 117134 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT 117193
|| ||| ||| ||||| |||||||| | || || | || || ||| | | |||
Sbjct 355997 GCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTT 355940
Query 117194 G--GGACATCTTATCGTAGGTCTCCAAGACA 117222
| ||||| | ||| ||||||||||||
Sbjct 355939 GCTTGACATGAGGTTGTATGTCTCCAAGACA 355909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613500535778040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |