Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq91 223 4e-53 seq324 98.7 1e-15 seq759 91.5 2e-13 >seq91 Length=149158 Score = 223 bits (246), Expect = 4e-53 Identities = 457/678 (67%), Gaps = 6/678 (1%) Strand=Plus/Plus Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467 |||||| || || || ||||| | | |||||| || ||| | ||||||||||| Sbjct 70502 CTTATGCTTTCGCTTGAACTCGTTAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTC 70561 Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || || || | ||||| || |||||||| | |||||| | Sbjct 70562 ACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGT 70621 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | || ||||| || ||||||||||| || || || ||||| ||||| || | Sbjct 70622 AAGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACC 70681 Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 || ||||| || |||||||| || || || || || || || || || || || || Sbjct 70682 CTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATTCG 70741 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 ||| ||| || || || || | ||||| || || || || || || || ||||| Sbjct 70742 GAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTGAGAGTCGTT 70801 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 |||||||| ||||| || || || |||| |||| ||| |||||| || || || || Sbjct 70802 GAAGTAGGCAGGGACGGTGACAACGGCGTTGTTGACAGTCTCACCGAGGTAAGACTCAGC 70861 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | || ||| ||||| || | ||| | || ||||| || | | || ||| | Sbjct 70862 AGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGGGTGAAGGTCTTCTT 70921 Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887 ||||| || || ||||| || || ||| || |||| | || | | | Sbjct 70922 CTCACCCTTGAACTCAACCTCGATGGCGGGCTT---GCCAGCCTTGTCAATGATTGTGAA 70978 Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947 | | | ||||||||| | ||||||| || | ||||| | ||||| | || Sbjct 70979 GGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGCGAACTTGCGGCCGATCAATCG 71038 Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007 ||| || || || || ||||| | |||||||||||| |||||||| || || || || Sbjct 71039 CTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACC 71098 Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067 || ||||| || | || || || ||||| | || ||||| ||||| || || || Sbjct 71099 AATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTTCGGTTACCCTG 71155 Query 8068 GTCGTTCGCAATAATTTC 8085 |||||| || || || || Sbjct 71156 GTCGTTGGCGATGATATC 71173 >seq324 Length=96282 Score = 98.7 bits (108), Expect = 1e-15 Identities = 170/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | ||| || || || ||||| || || || ||||| || Sbjct 60169 ATCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCGAGAACCTCGAAGATGCC 60228 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | || |||||||| || ||||||||||| || || | || | Sbjct 60229 ATCGTCAATGGAGAGCAGAGAAACATCGAAGGTACCACCACCGAGATCGTA---GACAAT 60285 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | || ||| | | |||||| || |||||||| |||||||| || || || || | Sbjct 60286 GATC-TGGCGCTCGCCATCGTTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTAGGCT 60344 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | ||| || || ||| || || ||||| | | || || || || || |||| Sbjct 60345 CGTTGACAATTCGGAGGACGTTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGTC 60404 Query 7695 GTTG 7698 | || Sbjct 60405 GCTG 60408 >seq759 Length=165177 Score = 91.5 bits (100), Expect = 2e-13 Identities = 226/339 (67%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | || ||||| || ||| | ||||| || || | ||| Sbjct 65607 ATCGAAATCTTCACCACCGAGATGGGTATCACCGTTGGTGGACTTGACCTCGAAAACACC 65548 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || | | | || | ||| || ||||||||||| || || | | || Sbjct 65547 GTTCTGGATCTCAAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGAC 65488 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | || | || ||| ||||||||||| || | ||| || || || || || Sbjct 65487 AATGCTGTCAGCCTC------CTTCTCGAGACCGTAGGCAAGAGCGGCGGCAGTAGGCTC 65434 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCT-TG 7692 || | | ||| || ||| ||||| ||||| ||| | || || || || ||| || Sbjct 65433 GTTGACGACACGGAGGACGTTGAGGCCGGCAAT--TTGACCAGCGTCCTTGGT-GCTCTG 65377 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| || || ||||| |||||||| ||||| || ||||| |||| | ||| |||| Sbjct 65376 TCGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTTCTTGATAGGCTTAGA 65317 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 ||| |||| || ||| | || ||||| ||| | || || Sbjct 65316 GAGGTACGCCTCGGCGGTCTCCTTCATCTTGTTGAGGAC 65278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125900869960