Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq109 205 1e-47 seq193 107 2e-18 >seq109 Length=515286 Score = 205 bits (226), Expect = 1e-47 Identities = 1099/1736 (63%), Gaps = 45/1736 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || |||||||| || | ||||| | | ||||| | | Sbjct 357576 CGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 357517 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | |||| ||| || || | |||| || || | | ||| ||| ||||||||| Sbjct 357516 ATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAG 357457 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766 |||||| | || ||||| | | || ||| || || |||||||| || Sbjct 357456 GCACCACGGTCAGCAGCCATCTGCA---CAACCTGTCGCTGAGAAATCTCCCACACAGTC 357400 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCC---CC 105823 ||| ||| |||||| || | ||||| | | ||| || || || ||||| | Sbjct 357399 TTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCA 357340 Query 105824 GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883 || ||| || | | ||||||| | | |||||||||||| || | ||||| ||| Sbjct 357339 GCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTG 357283 Query 105884 ACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTC 105943 | || |||||||| | ||||| || || ||| || | | |||||||| Sbjct 357282 AGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTG 357223 Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003 | ||||| || ||||||||||| || || || | || || | ||| ||| || ||| Sbjct 357222 GAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGC 357163 Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063 || || || | | |||||||| || | ||| | ||||| || ||| Sbjct 357162 ATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGT 357103 Query 106064 TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121 |||||||| | | | || || || || |||| |||| || || || || | || | Sbjct 357102 TCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTCGAACTGGAGAATACCCT 357045 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAG 106180 || | || || |||| || || |||| ||||| | | || | || ||||| Sbjct 357044 CAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAG 356985 Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240 || |||| ||||| || ||||| || ||||| | |||| ||| || Sbjct 356984 A-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCC 356926 Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300 ||| || ||||| | |||| || ||| |||| ||||||||||| ||||| Sbjct 356925 TCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCA 356866 Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360 | |||||| |||| ||| ||||| || || || || | || || || || Sbjct 356865 AGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTG 356806 Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420 ||| |||| ||| | ||| | ||||| | |||| || || || || | Sbjct 356805 ACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCTTCTTG 356746 Query 106421 TAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAA 106477 | || | || || ||||||| ||| | | || || | | || || | Sbjct 356745 AAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACAAGGAGGCAAGG 356689 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 ||||||||||| |||||| | ||| || | || || || |||| |||||| Sbjct 356688 TTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAG 356629 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || || || | ||||||||||||||||| ||||| ||||||||||||| Sbjct 356628 CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGC 356569 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGC 106656 ||| | || | || ||||| ||||| | || ||||| || | ||| | | | | | | Sbjct 356568 ATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCC 356509 Query 106657 TGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 | | || | | ||| ||| | ||||| |||||||||| ||| || || ||||| Sbjct 356508 TTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAAT 356452 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 106773 || ||||| ||| | || || || || || || || || | |||| ||||| Sbjct 356451 TCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACATGAGAGTCCATTC 356393 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 || ||| || |||||||||||||| || || ||||| || | | | || || || Sbjct 356392 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 356333 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 | | || |||| || | ||| || || ||| | ||||||||||| | || || Sbjct 356332 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 356273 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTG 106947 ||||||||||| ||||| |||| |||| || || ||| | ||| | || Sbjct 356272 GGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTA---CCACCCTG 356216 Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007 | || || || || ||| ||| || || || ||||| |||| ||||| | || Sbjct 356215 GTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGT 356156 Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067 |||||| || || || ||| | |||| | | ||| || || ||||| Sbjct 356155 ACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAAT 356096 Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127 ||| |||||| ||| || || ||||| | | || || | |||||||| | || Sbjct 356095 ACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAAT 356036 Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187 ||||||||| | | | ||||||||| || | ||| || ||| ||||| || Sbjct 356035 GCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGC 355976 Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTC 107245 ||||| | || || |||| ||| ||| | | |||| ||||| || ||||||| Sbjct 355975 GTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTC 355918 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 ||||||||| ||||| || || || ||| || | || || ||||| | ||| Sbjct 355917 TCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 355862 >seq193 Length=35663 Score = 107 bits (118), Expect = 2e-18 Identities = 305/460 (66%), Gaps = 24/460 (5%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 3817 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 3876 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099 ||||| || || || | | || | | | | || | | |||| |||| Sbjct 3877 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAGG 3930 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 |||||||| | || | || ||||||| ||| | |||||||| |||| || Sbjct 3931 AGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGG 3990 Query 117160 TTACATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 117217 ||| ||||| || || |||| ||| | | |||||| ||| || || | | | Sbjct 3991 GCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAA 4048 Query 117218 TGGCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 117274 || | ||||| | | | ||| ||| || | || | || ||| || || Sbjct 4049 TGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GG 4105 Query 117275 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTG 117334 |||| || ||| ||||||||||| || ||||| || || || || |||| || || | Sbjct 4106 CAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAG 4165 Query 117335 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||| || |||||||| | ||| | || | ||| || | ||| |||||||||| Sbjct 4166 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATA 4224 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 ||||| || ||||| |||| ||| |||| ||||||| Sbjct 4225 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGG 4264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974391333560