Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq109 205 1e-47
seq193 107 2e-18
>seq109
Length=515286
Score = 205 bits (226), Expect = 1e-47
Identities = 1099/1736 (63%), Gaps = 45/1736 (3%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
||||| |||||||| || |||||||| || | ||||| | | ||||| | |
Sbjct 357576 CGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 357517
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| || || | |||| || || | | ||| ||| |||||||||
Sbjct 357516 ATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAG 357457
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766
|||||| | || ||||| | | || ||| || || |||||||| ||
Sbjct 357456 GCACCACGGTCAGCAGCCATCTGCA---CAACCTGTCGCTGAGAAATCTCCCACACAGTC 357400
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCC---CC 105823
||| ||| |||||| || | ||||| | | ||| || || || ||||| |
Sbjct 357399 TTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCA 357340
Query 105824 GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883
|| ||| || | | ||||||| | | |||||||||||| || | ||||| |||
Sbjct 357339 GCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTG 357283
Query 105884 ACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTC 105943
| || |||||||| | ||||| || || ||| || | | ||||||||
Sbjct 357282 AGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTG 357223
Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003
| ||||| || ||||||||||| || || || | || || | ||| ||| || |||
Sbjct 357222 GAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGC 357163
Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063
|| || || | | |||||||| || | ||| | ||||| || |||
Sbjct 357162 ATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGT 357103
Query 106064 TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121
|||||||| | | | || || || || |||| |||| || || || || | || |
Sbjct 357102 TCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTCGAACTGGAGAATACCCT 357045
Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAG 106180
|| | || || |||| || || |||| ||||| | | || | || |||||
Sbjct 357044 CAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTTGCACAG 356985
Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240
|| |||| ||||| || ||||| || ||||| | |||| ||| ||
Sbjct 356984 A-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCC 356926
Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300
||| || ||||| | |||| || ||| |||| ||||||||||| |||||
Sbjct 356925 TCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCACACCA 356866
Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360
| |||||| |||| ||| ||||| || || || || | || || || ||
Sbjct 356865 AGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTG 356806
Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420
||| |||| ||| | ||| | ||||| | |||| || || || || |
Sbjct 356805 ACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCTTCTTG 356746
Query 106421 TAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAA 106477
| || | || || ||||||| ||| | | || || | | || || |
Sbjct 356745 AAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACAAGGAGGCAAGG 356689
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
||||||||||| |||||| | ||| || | || || || |||| ||||||
Sbjct 356688 TTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAG 356629
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
|| || || || | ||||||||||||||||| ||||| |||||||||||||
Sbjct 356628 CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGC 356569
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGC 106656
||| | || | || ||||| ||||| | || ||||| || | ||| | | | | | |
Sbjct 356568 ATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCC 356509
Query 106657 TGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714
| | || | | ||| ||| | ||||| |||||||||| ||| || || |||||
Sbjct 356508 TTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAAT 356452
Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 106773
|| ||||| ||| | || || || || || || || || | |||| |||||
Sbjct 356451 TCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACATGAGAGTCCATTC 356393
Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833
|| ||| || |||||||||||||| || || ||||| || | | | || || ||
Sbjct 356392 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 356333
Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893
| | || |||| || | ||| || || ||| | ||||||||||| | || ||
Sbjct 356332 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 356273
Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTG 106947
||||||||||| ||||| |||| |||| || || ||| | ||| | ||
Sbjct 356272 GGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTA---CCACCCTG 356216
Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007
| || || || || ||| ||| || || || ||||| |||| ||||| | ||
Sbjct 356215 GTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGT 356156
Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067
|||||| || || || ||| | |||| | | ||| || || |||||
Sbjct 356155 ACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAAT 356096
Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127
||| |||||| ||| || || ||||| | | || || | |||||||| | ||
Sbjct 356095 ACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAAT 356036
Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187
||||||||| | | | ||||||||| || | ||| || ||| ||||| ||
Sbjct 356035 GCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGC 355976
Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTC 107245
||||| | || || |||| ||| ||| | | |||| ||||| || |||||||
Sbjct 355975 GTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTC 355918
Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301
||||||||| ||||| || || || ||| || | || || ||||| | |||
Sbjct 355917 TCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 355862
>seq193
Length=35663
Score = 107 bits (118), Expect = 2e-18
Identities = 305/460 (66%), Gaps = 24/460 (5%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 3817 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 3876
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099
||||| || || || | | || | | | | || | | |||| ||||
Sbjct 3877 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAGG 3930
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
|||||||| | || | || ||||||| ||| | |||||||| |||| ||
Sbjct 3931 AGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGG 3990
Query 117160 TTACATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 117217
||| ||||| || || |||| ||| | | |||||| ||| || || | | |
Sbjct 3991 GCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAA 4048
Query 117218 TGGCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 117274
|| | ||||| | | | ||| ||| || | || | || ||| || ||
Sbjct 4049 TGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GG 4105
Query 117275 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTG 117334
|||| || ||| ||||||||||| || ||||| || || || || |||| || || |
Sbjct 4106 CAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAG 4165
Query 117335 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 117393
||||||| || |||||||| | ||| | || | ||| || | ||| ||||||||||
Sbjct 4166 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATA 4224
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
||||| || ||||| |||| ||| |||| |||||||
Sbjct 4225 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGG 4264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589974391333560
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