Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq109 324 3e-83
seq193 188 1e-42
>seq109
Length=515286
Score = 324 bits (358), Expect = 3e-83
Identities = 1160/1772 (65%), Gaps = 114/1772 (6%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || |||||||||||| || || || ||||||||||| |||||
Sbjct 357612 ACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGTCTTG 357553
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
|| || ||| |||||| | |||||| |||| ||| |||| | | ||
Sbjct 357552 AGACCGAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCCATGGTAG- 357501
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
|||| | || || || | ||| || |||||| ||| || ||||| | |
Sbjct 357500 --GGTCCT--TCATG-------TGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACC 357452
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| |||||| ||||| | | | | || ||| || | ||||||||| |||||| | |
Sbjct 357451 ACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAG 357392
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848
| |||| || | |||| | |||||||||||| | ||| || || ||| |||
Sbjct 357391 AGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACC---GT-TAT---CAG 357339
Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900
| || | ||| ||| | ||| ||| || ||| || | || |||||
Sbjct 357338 CAATG-ATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGA 357280
Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960
|| |||||||| | |||||| || || | || || | | ||||| | ||| ||
Sbjct 357279 AGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAG 357220
Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020
||||| ||||| | || |||||||| || |||||||| | || ||||| || |||||
Sbjct 357219 GTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATA 357160
Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTG---CTCGCCGATGAGGCGC-CGAAGCTC 213076
||||| || || |||||||| | | ||||| || | | | | | || ||
Sbjct 357159 GGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGAC----ATCCTCTCGGAGGGG 357104
Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136
| |||||||||| | |||| | ||| || ||||||||||| ||||| |
Sbjct 357103 TTCCCAGTCCCAAAGGTCAGAGGG---------CTTGACATTCCACATGTCGAACTGGAG 357053
Query 213137 GATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192
|| || |||| | ||| ||||| | | | ||||||||| || | ||||||||
Sbjct 357052 AATACC----CTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 356997
Query 213193 CCAGCTCGCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
| || | ||| |||| |||||||||| ||||||||| || || || | | ||||
Sbjct 356996 CGAGTT-GCACAGACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 356938
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
|||| ||||| || ||| |||||||| | | | || ||||||| ||
Sbjct 356937 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 356878
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || || | || ||||||| ||| | || ||| || |||| ||| | |
Sbjct 356877 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC-CTCTTGGAC 356819
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
||||| |||| ||||||||||||||| | |||||| | |||| ||||| |
Sbjct 356818 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTC 356759
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAG 213484
| ||| | || |||| |||||| | || | | ||| |||||
Sbjct 356758 GTGCAGCTTCT------TGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGGGCAG 356705
Query 213485 GGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTC 213544
| | | ||| ||||||||||| || ||||| | || | | ||| || ||||||||
Sbjct 356704 AGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTC 356645
Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTGG 213603
|||||||||||| || ||||||||| || ||||||| ||||| ||| ||||| | |
Sbjct 356644 AGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTG 356587
Query 213604 CAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGG 213662
||| |||||||||||||||| | ||| ||||||||| ||||| | | || || |
Sbjct 356586 CAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCG 356527
Query 213663 CTCCAGAGGTACCTGGCCTTGA-CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACT 213720
||| || | | ||||||| || || ||| | | | | | ||||||||
Sbjct 356526 TACCAAAGTTTCTGAGCCTTGATAGACTTGC--GACCCTTAC---CCTCTCTCTCGTACT 356472
Query 213721 GTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATGC 213778
|||||| || | | ||||||| || || | || ||| | || |||| || |
Sbjct 356471 TTTCGTACAGAGCCTCAAATTCGTCACCGTAG---CAGT-CAG-CAAGGCCAGGGCATTC 356417
Query 213779 G---GGACACATGAGGCTCCAGTCCCCGTCATCTCT-GACTCTCTGCATGAACAGGTCCG 213834
| || |||||||| |||| || |||| ||||| ||| | || |||||| || || |
Sbjct 356416 GTTAGGGCACATGAGAGTCCATTCGCCGT-TTCTCTCGACACGCTTCATGAAAAGATCAG 356358
Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGC 213894
||| ||| || || ||||||||| | | | ||| ||| || || || |
Sbjct 356357 GGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTC 356298
Query 213895 GCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGC 213954
| ||||| || || || |||| ||| |||||||| || || | ||||||||| ||||| |
Sbjct 356297 GGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCAC 356238
Query 213955 CCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGA 214011
| || | |||| || |||||||| || | || ||||||| | ||||| |
Sbjct 356237 CAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCA 356178
Query 214012 CGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA 214071
||| || | |||||||| || ||||| || || || || ||||| | ||| | |
Sbjct 356177 TGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGA 356118
Query 214072 --GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCT 214129
| || | | | || || || ||||| || |||||| |||||||| || | |
Sbjct 356117 TTCGGTGGGCGTTCA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTT 356060
Query 214130 CACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTCG 214188
| || || ||| || | |||||||| || | | ||| ||| |||||| |
Sbjct 356059 GAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCA-TATCAACAAGGAAGCATGATG 356001
Query 214189 AGAGCTGGGGC-CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAAC 214247
| ||||| ||| |||| | || | |||||| | |||||||| ||||| | | |||
Sbjct 356000 AAAGCTGAGGCTGTGGA-GTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAAC 355942
Query 214248 TTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279
||| | || | ||| |||| ||||||| |||
Sbjct 355941 TTGCTTGACATGAGGTTGTATGTCTCCAAGAC 355910
>seq193
Length=35663
Score = 188 bits (208), Expect = 1e-42
Identities = 487/733 (66%), Gaps = 23/733 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 3813 CTGGTAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 3872
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||| ||||||| | || |||||| | || ||| | | || |
Sbjct 3873 CATGAAGTCGAAAGGGTTGGTGGACTTGTACACCT-TCTCGTTGCCGAGAGCAACGAGGA 3931
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| |||| |||||| | |||||||| | ||||||| || ||||||||| | ||||
Sbjct 3932 GACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGG 3991
Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| ||| | ||||| || |||||||||| ||| || ||||| || | |||
Sbjct 3992 CACAAGGG-AGAGCCTCAGTAAGAAACTCCTGCTCAATAGAAACGGCATCGGTGATAATG 4050
Query 48077 TGCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAGAGCA 48128
| || || | |||| |||| || ||| || | ||| | | ||| |
Sbjct 4051 TCCT------GGATCATCTG----TTTGCTG-GCACGTCCCTTGAGGTGAGAGTGGAGGA 4099
Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188
||||||||||| |||| | || || || || |||||| |||| || |||| |
Sbjct 4100 GACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCA 4159
Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248
|||||||||||| || | || ||||||||||| || | || || | || |||||
Sbjct 4160 GACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGA 4219
Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308
|||| ||||| || || || || || || | || |||| | || |||||| ||
Sbjct 4220 AGATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCGAAGGTAGAGTTCTTATCCT 4279
Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368
|||||| | ||||| || |||||||| |||||| || || || || | |||
Sbjct 4280 GGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 4339
Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428
|||||| | | | || | | |||| | |||||| || || | |||
Sbjct 4340 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATG 4399
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
| || ||||| | ||||| || ||||||||| || |||||| | ||||| |
Sbjct 4400 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 4459
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| || || | ||||| ||| | |||||||||||||| || || || || ||||
Sbjct 4460 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 4519
Query 48549 CAAAGAAGGCAAG 48561
| ||||| |||||
Sbjct 4520 CGAAGAAAGCAAG 4532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931522681224960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |