Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq120 93.3 5e-14 >seq120 Length=163713 Score = 93.3 bits (102), Expect = 5e-14 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 || ||||| || | ||||||||| ||| | ||| | || |||| |||||| || Sbjct 80064 TATATCCTGGATGAAGCTGAGGAGCAGGGCATTGAAATACCATATTCGTTCCGTGCCGGG 80123 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 |||||||| | || || || | | | ||||| || | ||| || ||| |||||||||| Sbjct 80124 GCTTGTTCCGCCTGCGCCGGGATATTGGTCTCAGGGAGCGTCGATCAAGGCGACCAGTCT 80183 Query 158461 TTCCTGGACGATGACCAAATCGATTCTG--GTTTCATTCTGACTTGTGTTTCTTATCCTA 158518 ||||||| || |||| || | | | || | |||||| ||||| | ||||| | Sbjct 80184 CTCCTGGATGACAACCAGATTGGC-CGGAAGTAT-ATTCTGCTGTGTGTCGCCTATCCCA 80241 Query 158519 CAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGA 158555 | | || || ||||||||||| |||||||||| || Sbjct 80242 CGAACGACTGCGTGATTGAGACCAACAAGGAAGACGA 80278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547741250096040