Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq120 93.3 5e-14
>seq120
Length=163713
Score = 93.3 bits (102), Expect = 5e-14
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400
|| ||||| || | ||||||||| ||| | ||| | || |||| |||||| ||
Sbjct 80064 TATATCCTGGATGAAGCTGAGGAGCAGGGCATTGAAATACCATATTCGTTCCGTGCCGGG 80123
Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460
|||||||| | || || || | | | ||||| || | ||| || ||| ||||||||||
Sbjct 80124 GCTTGTTCCGCCTGCGCCGGGATATTGGTCTCAGGGAGCGTCGATCAAGGCGACCAGTCT 80183
Query 158461 TTCCTGGACGATGACCAAATCGATTCTG--GTTTCATTCTGACTTGTGTTTCTTATCCTA 158518
||||||| || |||| || | | | || | |||||| ||||| | ||||| |
Sbjct 80184 CTCCTGGATGACAACCAGATTGGC-CGGAAGTAT-ATTCTGCTGTGTGTCGCCTATCCCA 80241
Query 158519 CAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGA 158555
| | || || ||||||||||| |||||||||| ||
Sbjct 80242 CGAACGACTGCGTGATTGAGACCAACAAGGAAGACGA 80278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547741250096040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |