Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq601 98.7 2e-15 >seq601 Length=275 Score = 98.7 bits (108), Expect = 2e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 104815 GAACCTTCCATGTAGTTTGGCAGAGCTTTCCATTGCTCGTTCGCTACAGACGC-ATTACC 104873 ||||| | ||||| | ||||||||| |||||||| |||| ||||| |||| || || Sbjct 32 GAACCCTGGATGTAATCTGGCAGAGCCTTCCATTGTGCGTTGGCTAC-GACGTGATCCCC 90 Query 104874 GTGACTAACGCTCTTAACGACATCGTATGGGAACAATGCGCCAGCGTTGATCTTCGCTTC 104933 | || |||| |||||| || ||||||||||||| |||||||||||||| | || Sbjct 91 GCTACGAACGGACTTAACCACGTCGTATGGGAACACCGCGCCAGCGTTGATGGTAGCAGT 150 Query 104934 ACCTTTTTGAAGTGACTCGATGTAGCTTGTGTAACGAGCTGAAGCGTTACGACCGAATGC 104993 |||||||| || | |||| | ||| | | |||||| ||| || Sbjct 151 ACCTTTTTCCAGACCAGCTTTGTAAACAGCGTACTGTTCGCCAGCGTTTTTGTTGAACGC 210 Query 104994 TTGTTGATAACGAGCAGACGCTACAGAAGGCAATTTACCGAAGTCGAT 105041 || || ||||| |||||||| | ||||||| || ||||| ||||| Sbjct 211 TTTCTGGTAACGGGCAGACGCCAAGGAAGGCAGCTTGCCGAAATCGAT 258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790148216921760