Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq109 354 9e-93 seq193 102 9e-17 >seq109 Length=515286 Score = 354 bits (392), Expect = 9e-93 Identities = 1130/1731 (65%), Gaps = 45/1731 (3%) Strand=Plus/Minus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||| | Sbjct 357581 GTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGC 357522 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | |||| ||| | |||| || |||| |||||||| ||||| ||||| || | Sbjct 357521 TGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 357462 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | ||||| ||||| || ||||| | | ||| || | ||||||||| | | Sbjct 357461 TGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 357402 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425 || ||| | ||||| | ||| | |||||| | | ||| | | | |||| Sbjct 357401 TCTTGTACAGAGCCTTGATCTCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 357345 Query 78426 TCGCA-CAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCC 78481 | || |||| | | ||||| || | | ||| || || | ||||||| Sbjct 357344 TATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 357285 Query 78482 GGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537 || ||||| |||| | | ||||||||| || ||| ||||| ||||| Sbjct 357284 TGAGAAGCCAGG----GGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAG 357229 Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596 ||||||| ||||| ||||| ||||| | ||||||| || | ||||| | ||| ||| Sbjct 357228 ATGTTGGAGGTGTAAGGCTC-AAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGC 357170 Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT 78656 ||| ||||| || || || || ||| || || | ||| || ||||||| || | Sbjct 357169 GGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCG 357110 Query 78657 TAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710 ||| | |||||||| ||| | | || ||||||||| || || || Sbjct 357109 GAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGTCGAACTGGAGAAT 357050 Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770 |||||| || || || || |||||||| || ||| | || |||||||||||||||| Sbjct 357049 ACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGGCGAGTT- 356991 Query 78771 GCAT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829 ||| ||| ||||| |||||||| | | ||||||||| |||||| ||||| | Sbjct 356990 GCACAGACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCAC 356931 Query 78830 GCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGA 78889 | |||| | || || | | || ||| | ||| |||| || || || || | Sbjct 356930 GAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGACCTTGCA 356871 Query 78890 CGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAA 78949 | || | | | || |||||||| ||||||||||| || || ||| | | | ||||| Sbjct 356870 CACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGT 356811 Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009 ||| ||||||| ||||| || || || || |||| ||||||| || | Sbjct 356810 GGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCT 356751 Query 79010 TGGCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCA 79063 | ||| || | | || ||| | ||||| |||| || || ||| || || | Sbjct 356750 TCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACAAGGAGGCAA 356691 Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123 ||||||| || || ||| || ||| | || ||||| || ||||||| || | Sbjct 356690 GGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGG 356631 Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181 | ||| |||||| || | |||||| ||||| ||||| || ||| |||||||| Sbjct 356630 AG--CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTA 356573 Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241 | |||| | || | |||||||| ||| || |||| | ||| ||| | | | | Sbjct 356572 GAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGTTTCTG 356513 Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301 ||| || | ||| | ||||| | ||||| | ||||| | | || Sbjct 356512 AGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAA 356453 Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361 | || || ||| || | ||||| ||||| |||| |||||||| || ||| || Sbjct 356452 TTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTC 356393 Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421 ||| |||| || || |||||| || || |||||||| || || ||| ||||| Sbjct 356392 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 356333 Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481 || || | |||||| | || || ||| || || || || || || | || ||| Sbjct 356332 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 356273 Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541 ||||||||| || || || ||||||||||| | ||| |||||| || ||||||| Sbjct 356272 GGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTC 356213 Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601 ||||| || || ||||||||||| || || |||||||| ||||| |||| || || Sbjct 356212 AACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACC 356153 Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCG--AGCAGTGGATTCCGATG 79659 || || ||| ||| | || | || || | |||| | || | || || Sbjct 356152 ATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TTCGGTGGGCGTTCAAGCCAATA 356095 Query 79660 CCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATC 79719 || || | | |||||| || || || |||||| || |||||||| || || || Sbjct 356094 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATG 356035 Query 79720 GAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCG 79779 ||| ||||||||| | || |||||||| || | ||| || | ||||||||| Sbjct 356034 CTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCG 355975 Query 79780 TTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT--TTGGCTCATCAGATCGTACGTCT 79837 ||||| | || || | || || ||||||||||| ||| ||| || | ||| |||| Sbjct 355974 TTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTG--ACATGAGGTTGTATGTCT 355917 Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || ||| ||| | ||||| || ||| || || ||||| ||||||| Sbjct 355916 CCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGA 355866 Score = 334 bits (370), Expect = 8e-87 Identities = 914/1378 (66%), Gaps = 34/1378 (2%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||||||||| || || ||| || ||||| | ||| ||| ||||||||| Sbjct 355866 TCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGTCTTGGAGACATACA 355925 Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234 |||| ||| | || ||||||||||| || || | || || | |||||||||||||| Sbjct 355926 ACCTCATGT-CAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATTCAACGCCGGTACT 355984 Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294 | || ||| | || || ||||| || | ||||||||| ||||||||||| || Sbjct 355985 CCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGACAGCATTGATGGT 356044 Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354 |||||||| || |||||| || || || |||||| | | || ||||| || | Sbjct 356045 ATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTG 356104 Query 19355 CACTGCT--CGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 || | ||||| ||| | | ||| | ||| || || || || || Sbjct 356105 AACGCCCACCGAAT--CCGTGCCACTGGCTCTTACATCGCCGGTACCAATGGTACTTCCA 356162 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||||||||| || ||||| || || ||||||||||| || | ||||| ||||||| | Sbjct 356163 ACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTG 356222 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | ||| || || | |||||||||||||| || ||||||||||| |||||| | | Sbjct 356223 GTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGGCACGCCGACGTCTTCG 356282 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | ||||| || || || ||| || ||| | |||||| | ||| ||| ||||| ||| Sbjct 356283 AGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCT 356342 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 || | ||||| || || || |||||| || || |||| ||| |||||| | Sbjct 356343 TAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTC 356402 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712 | |||||||| |||||||||||||||| | ||| |||||| || | || | | Sbjct 356403 TCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTACGGTGACGAATTTGAGGCTC 356462 Query 19713 TGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771 ||||| | |||| || || || || ||| || ||| | | | | Sbjct 356463 TGTACGAAAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAGGCTCAGAAACTT 356521 Query 19772 TGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA- 19830 ||| || | | || | |||| |||||||| | || | |||| ||||||||| Sbjct 356522 TGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGAT 356581 Query 19831 CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCTG 19888 | | || | || |||| || || |||||| | || | ||| ||| ||||||||| Sbjct 356582 CACTGCAATCG-CAAGAGTAACCAAAAGAACCTTGGTACCATCCGAAG--CTCCAACCTG 356638 Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948 || ||||| ||||| || | | || || ||| || || || || || || ||| Sbjct 356639 TGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 356698 Query 19949 CTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002 ||| ||||| |||| ||| | | | | || |||||| || || || Sbjct 356699 TTGTCTCTGCCCTCTTTTATCAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTGCAC 356758 Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062 ||||| || | || || || ||| |||| ||||||| ||| ||||| Sbjct 356759 GAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCATCGACGTCAACCACTACCCT 356818 Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122 | | | ||| || || || ||||| ||||| || || | | || || || || Sbjct 356819 GTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCATTGGTCTTGGTGTGCAAGGT 356878 Query 20123 CTGGCCGACG-TTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCT 20181 || || || | |||| || ||| || | | || || ||| |||| || ||||| Sbjct 356879 CTCGCTGATGCCTTTCTTG-CCCTCCGCATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCT 356937 Query 20182 CAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC-TCCTGGAATCGTGCGAACTCG 20240 |||||| ||||||||| || | |||||||| |||| | || |||| |||||| Sbjct 356938 GAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACTACGTCTGTGC-AACTCG 356996 Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300 |||| ||||| || || ||| || |||||||| || || || || |||||||| |||| Sbjct 356997 CCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCC 357056 Query 20301 AGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTT 20353 || ||||||||| |||| |||| || | | ||| | ||||| | Sbjct 357057 AGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC-CCCTCCGAGAG 357115 Query 20354 GAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCG 20413 || ||||||| ||||| | |||||| ||||||| || || ||||| |||||| Sbjct 357116 GATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCCTACCGCCAGT 357175 Query 20414 ACCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAACATCTAC 20470 ||| | ||||| | || ||||||| | ||||| ||||| ||||| ||||||||||| Sbjct 357176 ACCTCGCAGATTCTTGGCAACAACGAATGCTTT-GAGCCTTACACCTCCAACATCTAC 357232 >seq193 Length=35663 Score = 102 bits (112), Expect = 9e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || || ||||| | |||||||| ||| || || ||||||||| || | || Sbjct 4262 TTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 4203 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | | || ||||||||||| ||||||||||||||||| || ||||| || || |||||| Sbjct 4202 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAG 4143 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118 || ||||| || || ||||| || || Sbjct 4142 CTCATTTCTCGTGATGAGGGTCTTCA 4117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548518841649360