Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq109 246 3e-60
seq215 127 2e-24
seq199 123 3e-23
seq720 116 4e-21
seq496 111 2e-19
seq193 96.9 4e-15
seq246 89.7 6e-13
>seq109
Length=515286
Score = 246 bits (272), Expect = 3e-60
Identities = 1131/1762 (64%), Gaps = 68/1762 (4%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || || || ||||||||||| |||||||| || ||||||||| | ||||
Sbjct 357585 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 357526
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| ||| | | || |||| || |||| ||||| |||||||||||||||
Sbjct 357525 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 357466
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCAT-TTCAATAATTGACTTTTGTGGAATTTCCCA 80210
||||| || ||||| || || ||||| | || | || | || | ||| |||||
Sbjct 357465 TCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTC-GCTGAGAAATCTCCCA 357407
Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCC 80267
|| || |||| |||| | ||| | || |||| | | | | |
Sbjct 357406 CACAGTCTTGTACAGAGCCTT---GATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGA 357350
Query 80268 ACCGTCCTTTACA---ATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAG 80324
||||| | || || | || |||| || | ||| | ||| | | | ||
Sbjct 357349 ACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAG 357290
Query 80325 ATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAG 80381
||| || | ||| | | ||| || | || ||||| || || ||| || || |
Sbjct 357289 ATCCTTGAGAAGCCAGGGGTTGACAA-CCTG--GAACTCGCCAGCAAGGACTCGGCGTTG 357233
Query 80382 ATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCT 80441
|| | ||| | |||||||||||||| |||||||| || || ||||| | || ||
Sbjct 357232 GTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACT 357173
Query 80442 CGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC 80501
|| || ||||| || | || | ||| || || | ||||| |||||| ||||||
Sbjct 357172 GGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTC 357113
Query 80502 GCGCA---AATCTGA---CCAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGC 80553
|| | || | ||||| ||| | ||| |||| |||||||||| |
Sbjct 357112 TCGGAGGGGTTCCCAGTCCCAAAGGTCA----GAGGGCT-TGACATTCCACATGTCGAAC 357058
Query 80554 TGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG 80613
|| | || ||||| || || || || ||| ||| || ||| || || ||| ||||
Sbjct 357057 TGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTG 356998
Query 80614 GCCAGCT-CACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTT 80672
|| || | |||| ||| ||||||| ||||| || ||| ||| |||| ||||||
Sbjct 356997 GCGAGTTGCACA-GACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 356939
Query 80673 CACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAG 80732
|| | || |||| || || || | || || | | || | ||||| ||
Sbjct 356938 CAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAG 356879
Query 80733 GCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAA 80791
|| || || || | | || || ||||| ||| |||| | | || ||||| | |
Sbjct 356878 ACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTT-GCTGTTACGAGCCTCTTGGA 356820
Query 80792 TTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACAT 80851
||||| ||| ||||||| ||||| ||||| |||||| | || || |
Sbjct 356819 CAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCT 356760
Query 80852 CATGAAGTTTCTGAAAGTCGAA--TTGGTTCCCC----TTCACAAATGCCGGAAGGCTCA 80905
| || || |||| |||||| | | || | || | ||| | || || ||
Sbjct 356759 CGTGCAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGACA 356700
Query 80906 GGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGC 80965
||| || || ||||| || || ||||| |||| | | || | ||| || ||||
Sbjct 356699 AGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGC 356640
Query 80966 ACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGC 81023
||| || || ||| || ||||| ||||| || ||||| |||| |||||
Sbjct 356639 ACAGGTTGGA--GCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTG 356582
Query 81024 GTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCA 81083
||||||||| |||| | ||| | |||||||| ||| | || || ||||||| |||
Sbjct 356581 ATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCA 356522
Query 81084 AATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGC 81143
|| | | ||||||| |||||| || || || | | ||||| ||||
Sbjct 356521 AAGTTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAG 356462
Query 81144 TTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202
| || || | | |||||| | || |||| ||| | ||||| |||||||||||||| |
Sbjct 356461 AGCCTCAAATTCGTCACCGTAGCAG-TCAGCAAGGCCAGGGCATTCGTTAGGGCACATGA 356403
Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262
| ||| ||| || |||| ||| |||||||||| ||||||||||| || ||
Sbjct 356402 GAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTA 356343
Query 81263 TGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAA 81320
||||||||| || |||||| ||||||| | ||| || || || | || || ||
Sbjct 356342 AGAACAGGTCACG--AGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAA 356285
Query 81321 GTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTGCG 81374
|| | || ||| || |||||||| || || || | ||||| | || | ||||
Sbjct 356284 CTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTT 356225
Query 81375 ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434
| |||||||||| |||||||| ||||| ||| || ||||||| ||| || | |||
Sbjct 356224 A---CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAT 356168
Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTG 81492
||| | || ||| || ||||| |||| || || |||| || | | ||
Sbjct 356167 ACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGC 356108
Query 81493 ATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCA 81552
|| || || || ||||| | | ||| |||||| ||||| || | ||| ||
Sbjct 356107 GTTCAA--GCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCG 356050
Query 81553 TAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGG 81612
|| || || || ||||| || | ||||| |||| | ||| || ||| | ||||||
Sbjct 356049 TAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG- 355991
Query 81613 CTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACA 81670
| | ||| ||||| ||||| | || ||| | || ||| |||| | | ||||||
Sbjct 355990 -CTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACA 355932
Query 81671 TCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACAC 81730
| |||| || || ||| ||| || |||||||||||| || || | ||| || |
Sbjct 355931 TGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTC 355872
Query 81731 GCATAAACATGTACTG-GGGCG 81751
|||| | ||| | ||| |||||
Sbjct 355871 GCATGATCATATGCTGCGGGCG 355850
>seq215
Length=125206
Score = 127 bits (140), Expect = 2e-24
Identities = 298/446 (67%), Gaps = 4/446 (1%)
Strand=Plus/Plus
Query 31959 CAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATA 32018
|| ||| || |||||| || |||||| ||||||| ||||||||||| || ||
Sbjct 27989 CATGCGATCTATTCCATCTGTTCTGGACGGATTCAAGCCCGGTCAGCGCAAGGTCATCTA 28048
Query 32019 CGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGT 32078
||| ||| |||||| ||| || | |||| |||||| | | || | || || ||
Sbjct 28049 CGCGTGCTTCAAGAGAAACTTGATCAAAGACAAGAAGGTCGTTGAATTGGCAGGTTATGT 28108
Query 32079 GGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCT 32138
| | || || ||||| || |||||||| || ||| || || |||||| | |||
Sbjct 28109 GTCCGAACAGACGGCATACCACCACGGTGAACAGTCACTTCAACAGACCATTATTGGCCT 28168
Query 32139 TGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGG 32198
|||||||||||| || || | || ||| | |||| || || || |||| | || ||
Sbjct 28169 TGCTCAGAACTTCGTGGGCTCGAACAACATCAACTGCCTGGAACCCAGTGGAAACTTCGG 28228
Query 32199 GACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCG--TCTC 32256
| || || || ||||| |||||||| || | ||||||| |||||||| | ||
Sbjct 28229 TTCTCGACTTGCAGGTGGTTCTGATGCTGCCAGTCCTCGTTACACTTTCACCCGACTATC 28288
Query 32257 GCACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTT 32316
|| |||||| | ||||| || || |||| ||| || | || | || ||| |
Sbjct 28289 GC-CCTTCG-CCCGCAAAATCTTTCACCCTATGGATGAGCCCAACCTGTTGCACCATTAT 28346
Query 32317 GATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTG 32376
|| || || || ||||||| || | || || | ||||| ||| | ||||
Sbjct 28347 GAAGATGGCAAGAAAATCGAGCCAATGGTATATGCCCCAATTCTTCCCATGGTACTGGTC 28406
Query 32377 AACGGTGCAGAAGGCATCGGAACGGG 32402
|||||||| || || || || || ||
Sbjct 28407 AACGGTGCCGATGGTATTGGCACAGG 28432
>seq199
Length=44064
Score = 123 bits (136), Expect = 3e-23
Identities = 111/137 (81%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 27497 AGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCG 27556
||||||||||||| || || || ||||||||||| || || |||||||||||||| ||||
Sbjct 8517 AGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCG 8458
Query 27557 AGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615
|||||| || ||||| ||| ||||| || |||| ||||| ||||| ||||| | |||
Sbjct 8457 AGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTC 8399
Query 27616 TTGCGTCTTCGCGGTGG 27632
| || ||||| |||||
Sbjct 8398 CTCCGCCTTCGTGGTGG 8382
>seq720
Length=827
Score = 116 bits (128), Expect = 4e-21
Identities = 100/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| | ||||||||||||||||| || |||||||||||| |
Sbjct 124 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCATCT 65
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | || | ||| | || ||||||||||||||||| || ||||| || |||
Sbjct 64 GATACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAG 5
Query 27526 CAGC 27529
||||
Sbjct 4 CAGC 1
>seq496
Length=401694
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || ||||| || || |||||||| || || || ||||| ||||| || | |||
Sbjct 192729 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGACACCATC 192788
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| || || || || |||||||| |
Sbjct 192789 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGATTG 192848
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || || || ||||| |||||||||| || ||||| | ||||| || |||| |||
Sbjct 192849 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAG 192908
Query 27595 G 27595
|
Sbjct 192909 G 192909
>seq193
Length=35663
Score = 96.9 bits (106), Expect = 4e-15
Identities = 256/386 (66%), Gaps = 9/386 (2%)
Strand=Plus/Minus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719
|| ||||| || ||||||||||| ||||| | || || | || | |||||||
Sbjct 4310 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTCGCTCAGCGT 4251
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|| | |||||||| || || || || ||||| || | || ||| || |||
Sbjct 4250 CTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTC 4191
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| ||||| ||||| |||||| ||||| |||||||| || |||||
Sbjct 4190 TGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGT 4131
Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAA-GGACAAACC 64898
|| ||||| || ||| || ||||| | ||| | |||||||| |||| ||
Sbjct 4130 GATGAGGGTCTTCACACCGACTTTGCCTGTCTCCTCCACTCTCACCTCAAGGGACGTGCC 4071
Query 64899 ATCACATGGGACTATAATTGATATAGTAAAATCG--GCTGTAGAAATTGAAAAGGAATTC 64956
| || | || || || || || | || || || ||||| |||| ||
Sbjct 4070 AGCA-AACAGATGATCCAGGACAT--TATCACCGATGCCGTTTCTATTGAGCAGGAGTTT 4014
Query 64957 ATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTAT 65016
|||||| || || || ||| || |||||||| | || | ||||| |||||
Sbjct 4013 CTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTAC 3954
Query 65017 ATCGAATTTGTAGCAGATCGCCTGCT 65042
|||||||| || || ||||| || ||
Sbjct 3953 ATCGAATTCGTCGCTGATCGTCTCCT 3928
>seq246
Length=212372
Score = 89.7 bits (98), Expect = 6e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || || |||||||| || || || ||||| ||||||
Sbjct 108009 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 107950
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512
|| | ||| | ||| ||||| | || || |||||||||||||| ||
Sbjct 107949 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCAT 107903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570304205003280
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