Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq601 107 2e-18 >seq601 Length=275 Score = 107 bits (118), Expect = 2e-18 Identities = 177/254 (70%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 131342 AAAGACTGGAATTCTATTGATTTCGGCAAACTGCCTTCCCTGGCGTCTGCACGTTATCAG 131401 ||||||||| | || ||||||||||| ||||||||| |||||||||| ||||| ||| Sbjct 273 AAAGACTGGCAGAACATCGATTTCGGCAAGCTGCCTTCCTTGGCGTCTGCCCGTTACCAG 214 Query 131402 AAAGCGTTTGGTCGTAACGCTGGTGAGGCATACTCTGCTTACATCAAATC---CCTTGAA 131458 |||||||| |||||||| || ||| ||| ||| |||| | || ||| Sbjct 213 AAAGCGTTCAACAAAAACGCTGGCGAACAGTACGCTGTTTA---CAAAGCTGGTCTGGAA 157 Query 131459 AAAGGTGAAGCGAAGATCAACGCAGGTGCTGTGTATCCGTACGACATCACCAAGTCTCTG 131518 |||||| || | |||||||| || || |||| || |||||| | ||||| | Sbjct 156 AAAGGTACTGCTACCATCAACGCTGGCGCGGTGTTCCCATACGACGTGGTTAAGTCCGTT 97 Query 131519 ACATTCGGTAATCAATCTGTTGCAAACGCACAGTGGAAAGCTCTGCCCGACTACTGCGAC 131578 ||| |||| || || |||||||| ||||| |||||||| || ||| | | Sbjct 96 CGTAGCGGGGATCACGTCGTAGCCAACGCACAATGGAAGGCTCTGCCAGATTACATCCAG 37 Query 131579 GGTTCAACTGAACG 131592 ||||| || || || Sbjct 36 GGTTCGACCGAGCG 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582729670030200