Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_028773.1
Length=182145
Score E
Sequences producing significant alignments: (Bits) Value
seq601 107 2e-18
>seq601
Length=275
Score = 107 bits (118), Expect = 2e-18
Identities = 177/254 (70%), Gaps = 6/254 (2%)
Strand=Plus/Minus
Query 131342 AAAGACTGGAATTCTATTGATTTCGGCAAACTGCCTTCCCTGGCGTCTGCACGTTATCAG 131401
||||||||| | || ||||||||||| ||||||||| |||||||||| ||||| |||
Sbjct 273 AAAGACTGGCAGAACATCGATTTCGGCAAGCTGCCTTCCTTGGCGTCTGCCCGTTACCAG 214
Query 131402 AAAGCGTTTGGTCGTAACGCTGGTGAGGCATACTCTGCTTACATCAAATC---CCTTGAA 131458
|||||||| |||||||| || ||| ||| ||| |||| | || |||
Sbjct 213 AAAGCGTTCAACAAAAACGCTGGCGAACAGTACGCTGTTTA---CAAAGCTGGTCTGGAA 157
Query 131459 AAAGGTGAAGCGAAGATCAACGCAGGTGCTGTGTATCCGTACGACATCACCAAGTCTCTG 131518
|||||| || | |||||||| || || |||| || |||||| | ||||| |
Sbjct 156 AAAGGTACTGCTACCATCAACGCTGGCGCGGTGTTCCCATACGACGTGGTTAAGTCCGTT 97
Query 131519 ACATTCGGTAATCAATCTGTTGCAAACGCACAGTGGAAAGCTCTGCCCGACTACTGCGAC 131578
||| |||| || || |||||||| ||||| |||||||| || ||| | |
Sbjct 96 CGTAGCGGGGATCACGTCGTAGCCAACGCACAATGGAAGGCTCTGCCAGATTACATCCAG 37
Query 131579 GGTTCAACTGAACG 131592
||||| || || ||
Sbjct 36 GGTTCGACCGAGCG 23
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582729670030200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |