Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq601 102 1e-16 >seq601 Length=275 Score = 102 bits (112), Expect = 1e-16 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 210270 ATCGACTTCGGTAAGTTGCCTTCTGTAGCGTCTGCTCGTTATCAACAAGCATTCGGTCGT 210329 ||||| ||||| ||| ||||||| | |||||||| ||||| || |||| ||| Sbjct 258 ATCGATTTCGGCAAGCTGCCTTCCTTGGCGTCTGCCCGTTACCAGAAAGCGTTCAACAAA 199 Query 210330 AACGCTTCAGCTCGTTACACAAGCTACATCGAGTCACTTCAAAAAGGTGAAGCGAAGATC 210389 |||||| | | ||| | |||| | || |||||||| || | ||| Sbjct 198 AACGCTGGCGAACAGTACGCTGTTTACAAAGCTGGTCTGGAAAAAGGTACTGCTACCATC 139 Query 210390 AACGCTGGCGCATTGTTCCCATACGATGTCGTTAAGAGCGTTAGTCACGGTAAT-GCGTC 210448 ||||||||||| ||||||||||||| || |||||| |||| || ||| || |||| Sbjct 138 AACGCTGGCGCGGTGTTCCCATACGACGTGGTTAAGTCCGTTCGTAGCGGGGATCACGTC 79 Query 210449 TGTAGCGAACGAGCAATGGAAAGCTCTGCCAAACTACATGGAAGGTTC 210496 ||||| |||| |||||||| ||||||||| | ||||| | ||||| Sbjct 78 -GTAGCCAACGCACAATGGAAGGCTCTGCCAGATTACATCCAGGGTTC 32 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793744977851520