Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31]
869 sequences; 36,490,312 total letters
Query= NC_028829.1
Length=248088
Score E
Sequences producing significant alignments: (Bits) Value
seq601 102 1e-16
>seq601
Length=275
Score = 102 bits (112), Expect = 1e-16
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 210270 ATCGACTTCGGTAAGTTGCCTTCTGTAGCGTCTGCTCGTTATCAACAAGCATTCGGTCGT 210329
||||| ||||| ||| ||||||| | |||||||| ||||| || |||| |||
Sbjct 258 ATCGATTTCGGCAAGCTGCCTTCCTTGGCGTCTGCCCGTTACCAGAAAGCGTTCAACAAA 199
Query 210330 AACGCTTCAGCTCGTTACACAAGCTACATCGAGTCACTTCAAAAAGGTGAAGCGAAGATC 210389
|||||| | | ||| | |||| | || |||||||| || | |||
Sbjct 198 AACGCTGGCGAACAGTACGCTGTTTACAAAGCTGGTCTGGAAAAAGGTACTGCTACCATC 139
Query 210390 AACGCTGGCGCATTGTTCCCATACGATGTCGTTAAGAGCGTTAGTCACGGTAAT-GCGTC 210448
||||||||||| ||||||||||||| || |||||| |||| || ||| || ||||
Sbjct 138 AACGCTGGCGCGGTGTTCCCATACGACGTGGTTAAGTCCGTTCGTAGCGGGGATCACGTC 79
Query 210449 TGTAGCGAACGAGCAATGGAAAGCTCTGCCAAACTACATGGAAGGTTC 210496
||||| |||| |||||||| ||||||||| | ||||| | |||||
Sbjct 78 -GTAGCCAACGCACAATGGAAGGCTCTGCCAGATTACATCCAGGGTTC 32
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793744977851520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |