Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq120 93.3 5e-14 >seq120 Length=163713 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 176157 TGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAG-TTGAACTCAACTA 176215 |||||||| ||| ||||| ||||||| |||||||| ||||| ||||| | || Sbjct 80049 TGTGCTGATGATACTTATATCCTGGATGAAGCTGAGGA-GCAGGGCATTGAAATACCATA 80107 Query 176216 CTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGA 176275 |||| ||| || || || ||||| || || || | | | |||| || | || || Sbjct 80108 TTCGTTCCGTGCCGGGGCTTGTTCCGCCTGCGCCGGGATATTGGTCTCAGGGAGCGTCGA 80167 Query 176276 TCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGAT-GCAGGTTTCATTCTGACTT 176334 |||| |||| || || |||| ||||| ||||||| | | | || | |||||| | Sbjct 80168 TCAAGGCGACCAGTCTCTCCTGGATGACAACCAGATTGGCCGGAAGTAT-ATTCTGCTGT 80226 Query 176335 GTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386 |||| | ||||| |||| ||| || ||||||||||| | || ||||| || Sbjct 80227 GTGTCGCCTATCCCACGAACGACTGCGTGATTGAGACCAACAAGGAAGACGA 80278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596300722613040