Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq380 116 4e-21
>seq380
Length=646993
Score = 116 bits (128), Expect = 4e-21
Identities = 203/295 (69%), Gaps = 3/295 (1%)
Strand=Plus/Plus
Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285
|||| | || || ||||||||||| ||| ||| |||||||||| |||||||||||
Sbjct 392470 GGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCA 392529
Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345
||||| || || || |||||||| || || | || || || || || |||||| |
Sbjct 392530 TGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCT 392589
Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405
| | ||||| || || |||||||||||| || ||||| || || | || || |
Sbjct 392590 CAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGCGAAGAAAGCAAGAATGTGGGAGA 392649
Query 17406 TGAAATATTTTTCGTCCGGTGTAA---GAACGCGCCAGTCCTTTAAATCTTTGGATATAT 17462
|||| |||| ||||| | || | | | |||||| | | ||| ||||| | ||
Sbjct 392650 TGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCCAGTCGTGGAGATCCTTGGAGAGAT 392709
Query 17463 CCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
| | || || | ||||| || ||| ||||||| || ||||| | ||| ||
Sbjct 392710 CGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCTTCTTGTACATTTGCCAGAT 392764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517542455910480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |