Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq58 84.2 2e-11
>seq58
Length=162708
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/222 (69%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| || || || | ||| | || | ||||| || || || || || |||||||| |||
Sbjct 43790 TGTCCACCACGAAGACGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTATAGTCG 43849
Query 139595 CTCATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGG 139652
| || |||| ||| |||||||| || || || | |||| || |||||||| |
Sbjct 43850 GAGAGGGT--TCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAG 43907
Query 139653 GAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCT 139712
|||| || || || ||||| ||| || || | | || | ||||||| | ||
Sbjct 43908 GAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACT 43967
Query 139713 CCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754
| ||||||| ||| | |||||||||||||| || || ||||
Sbjct 43968 CGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGA 44009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496060986411200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |