Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq58 84.2 2e-11 >seq58 Length=162708 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/222 (69%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 || || || || | ||| | || | ||||| || || || || || |||||||| ||| Sbjct 43790 TGTCCACCACGAAGACGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTATAGTCG 43849 Query 139595 CTCATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGG 139652 | || |||| ||| |||||||| || || || | |||| || |||||||| | Sbjct 43850 GAGAGGGT--TCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAG 43907 Query 139653 GAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCT 139712 |||| || || || ||||| ||| || || | | || | ||||||| | || Sbjct 43908 GAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACT 43967 Query 139713 CCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754 | ||||||| ||| | |||||||||||||| || || |||| Sbjct 43968 CGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGA 44009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060986411200