Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq58 98.7 2e-15 >seq58 Length=162708 Score = 98.7 bits (108), Expect = 2e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| ||||| || |||||||| || || |||| |||||| Sbjct 43807 AAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTATAGTCGGAGAGGGTTCGACCGTC 43866 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || ||||| | | ||| ||||||||||| || || || || || Sbjct 43867 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTC 43926 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| | || || || || | || ||| | || ||||| || || || || Sbjct 43927 CTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGATGGT 43986 Query 104527 CTTACCAGT 104535 ||| || || Sbjct 43987 CTTGCCGGT 43995 Score = 84.2 bits (92), Expect = 5e-11 Identities = 137/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || || || || || | || || || || || || || Sbjct 44105 GTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 44164 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | ||| ||||||||||| || || || ||||| ||||| | || Sbjct 44165 GCGAAAATCAATCGCTGCTGATCAGGAGGGAT--NNTCCTTGTCCTGGATCTTGGACTTC 44222 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| | || ||||| || || || ||||| || || || || Sbjct 44223 ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 44282 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 44283 TTGACGAAGATTTGCAT 44299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151391230386088