Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq58 102 8e-17
>seq58
Length=162708
Score = 102 bits (112), Expect = 8e-17
Identities = 163/234 (70%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 26781 GTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAG 26840
|| || || || || || || | |||||| | || | || ||| |||||| |||||
Sbjct 44007 GTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACTATCGAC 43948
Query 26841 CAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATT 26900
| ||||| ||||| ||||| || || || ||||| ||||| || || | |||
Sbjct 43947 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATT 43888
Query 26901 TACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAA 26960
| || |||||| || ||||| || | | ||| | || |||||||||||| || || |||
Sbjct 43887 TTCGCCGGCAAGCAGCTCGAGGACGGTCGAACCCTCTCCGACTATAACATCCAGAAGGAA 43828
Query 26961 TCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA----AAAATATGATTAGT 27010
|| || | || |||||||| | ||| | || ||| | | ||||||||||
Sbjct 43827 TCAACCCTTCACCTGGTCCTTCGTCTTCGTGGTGGACAGTAGATTATGATTAGT 43774
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/212 (69%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | || || || | |||||| |||| | || ||| |
Sbjct 44299 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 44240
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | || || ||||| ||||| || || ||||| |||||
Sbjct 44239 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGA--NNATCCCTCCTGATCAG 44182
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || |||||| || ||||| |||| | | | || ||| || |||
Sbjct 44181 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACAAC 44122
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || || ||| |||| || |||||
Sbjct 44121 ATTCAGAAGGAGTCGACTCTCCACCTCGTCCT 44090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478659492125920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |