Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq58 102 8e-17 >seq58 Length=162708 Score = 102 bits (112), Expect = 8e-17 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 26781 GTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAG 26840 || || || || || || || | |||||| | || | || ||| |||||| ||||| Sbjct 44007 GTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACTATCGAC 43948 Query 26841 CAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATT 26900 | ||||| ||||| ||||| || || || ||||| ||||| || || | ||| Sbjct 43947 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATT 43888 Query 26901 TACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAA 26960 | || |||||| || ||||| || | | ||| | || |||||||||||| || || ||| Sbjct 43887 TTCGCCGGCAAGCAGCTCGAGGACGGTCGAACCCTCTCCGACTATAACATCCAGAAGGAA 43828 Query 26961 TCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA----AAAATATGATTAGT 27010 || || | || |||||||| | ||| | || ||| | | |||||||||| Sbjct 43827 TCAACCCTTCACCTGGTCCTTCGTCTTCGTGGTGGACAGTAGATTATGATTAGT 43774 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || || | |||||| |||| | || ||| | Sbjct 44299 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 44240 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| ||||| || || ||||| ||||| Sbjct 44239 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGA--NNATCCCTCCTGATCAG 44182 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| || |||||| || ||||| |||| | | | || ||| || ||| Sbjct 44181 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACAAC 44122 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || ||| |||| || ||||| Sbjct 44121 ATTCAGAAGGAGTCGACTCTCCACCTCGTCCT 44090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659492125920