Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq58 93.3 4e-14 seq323 86.0 5e-12 >seq58 Length=162708 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | || ||| |||| |||||| | | Sbjct 44299 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 44240 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| || || ||||| ||||| Sbjct 44239 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGA--NNATCCCTCCTGATCAG 44182 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||||| || ||||||||| ||||| |||| | | | | || |||||| ||| Sbjct 44181 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGATTACAAC 44122 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || || || || Sbjct 44121 ATTCAGAAGGAGTCGAC 44105 >seq323 Length=1534178 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| |||||| | ||||||||||| | ||||| ||||| ||| Sbjct 1260142 ATCACCCTCGAGGTCGAGTCTTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 1260201 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || ||||| ||| || |||| | || ||||||||| ||||| ||| Sbjct 1260202 AAGGAGGGCATCCCCCCGGATCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGAT 1260261 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| | || ||| || ||||| || || Sbjct 1260262 GGCCGAACCCTCTCCGACTACAACATCCAGAA 1260293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933453435330