Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq85 93.3 4e-14
>seq85
Length=135120
Score = 93.3 bits (102), Expect = 4e-14
Identities = 164/238 (69%), Gaps = 7/238 (3%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || || || | || || || || || |||||||| |||
Sbjct 93952 ATACCACCACGAAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 94011
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| || || ||| || || || |||||||| |||| || ||||| ||||||||
Sbjct 94012 CTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGG 94071
Query 114273 GGAATGCCTTCTTTGTCG-GCA------ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGT 114325
|| || || || ||||| | | ||||| || | | |||| ||||||||
Sbjct 94072 GGGATACCCTCCTTGTCCTGGATNNTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGA 94131
Query 114326 GGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || || || | ||| | ||| || || || || || || || ||||||||||||
Sbjct 94132 AGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATG 94189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420131911491432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |