Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq389 161 1e-34 >seq389 Length=813516 Score = 161 bits (178), Expect = 1e-34 Identities = 1076/1708 (63%), Gaps = 67/1708 (4%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 462449 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 462390 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 || || | |||| | || || | |||| | ||| | | || || ||| Sbjct 462389 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 462330 Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 113764 || |||||| ||||| || || ||||| | |||| ||| || || ||| Sbjct 462329 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 462273 Query 113765 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAG 113824 |||||||| |||| || ||| || || | ||||| | ||| || ||||| || Sbjct 462272 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 462213 Query 113825 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 113881 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 462212 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 462156 Query 113882 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 113938 ||||||| |||| || |||||||| ||||| || || ||| || | Sbjct 462155 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 462099 Query 113939 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTG 113998 | ||||| |||| ||||| ||||||||||| || ||||| || | || || | ||| Sbjct 462098 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 462039 Query 113999 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 114058 ||| || ||||| || || | ||| || ||||| |||| ||| | | | | Sbjct 462038 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 461979 Query 114059 TCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 114116 || ||||| |||||||| | | | || | || | | |||||| || |||| Sbjct 461978 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 461921 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 |||| ||||| | ||||| || || |||| || || ||| || || || ||| | Sbjct 461920 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTGG 461861 Query 114177 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 | | || | || || ||||| ||||| || || ||||| || || | ||| Sbjct 461860 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 461802 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | | ||||| || ||||| | | ||| || ||| |||| |||||| Sbjct 461801 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGAAAGGCATCAGCGAGA 461742 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 114355 ||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 461741 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 461682 Query 114356 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 114415 || || || ||||| | | | || | ||| | ||||| | |||| || Sbjct 461681 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 461622 Query 114416 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 114472 || ||||| | | | || | || || ||||||| ||| | | || || | Sbjct 461621 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATAAAAGAGGGCAGAGAC 461565 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 | || || || || || |||| | |||||| | ||| || || || || || Sbjct 461564 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 461505 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTACACG 114590 |||| || || || ||||| || | ||||||||| || ||| ||| | || || Sbjct 461504 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGCAGT 461447 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 ||||||||| |||||| | || | || ||||| || |||| || ||||| || | || Sbjct 461446 GATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACC 461387 Query 114651 AGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTT 114703 | | | | | | || | | | ||| || |||| |||| |||||||||| Sbjct 461386 AAAGTTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTACTTT 461334 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GG 114762 ||| || || ||||| || ||||| | || | || || || || || | || Sbjct 461333 TCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGG 461275 Query 114763 GCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCA 114822 ||| | ||||| ||||| || ||| |||||||||||||| || || |||||||| Sbjct 461274 GCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCA 461215 Query 114823 GAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 114882 |||||| |||| || || ||| ||| | || || | || ||||| || | || Sbjct 461214 AAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATC 461155 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 | || || | || || |||||||| ||||| ||||| | |||| | || | | Sbjct 461154 AAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCACC---AGG 461098 Query 114943 ACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGG 114996 || |||| |||||| || || | || ||| || || || || ||||| || Sbjct 461097 TCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGG 461038 Query 114997 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACA 115054 || |||||| | || ||||| || || ||| || ||| | | |||| | || Sbjct 461037 AACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATT 460980 Query 115055 TCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 115114 ||| || || |||||||| || ||| ||| || || || || | |||| Sbjct 460979 CGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGG 460920 Query 115115 CTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATT 115174 | ||||||| || || || ||| |||| | | | ||||||||| || | Sbjct 460919 GTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGC 460860 Query 115175 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG- 115233 || ||| ||| ||||| |||||||| | || || | || || ||| | | |||| Sbjct 460859 TGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGC 460802 Query 115234 -GGACATCTTATCGTAGGTCTCCAAGAC 115260 ||||| | ||| ||||||||||| Sbjct 460801 TTGACATGAGGTTGTATGTCTCCAAGAC 460774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349971076880