Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq58 89.7 5e-13 >seq58 Length=162708 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || |||||||||||||| | || |||||| | || || |||||||||||| Sbjct 44105 GTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 44164 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | |||||||| || ||||| || || || || || || || ||| Sbjct 44165 GCGAAAATCAATCGCTGCTGATCAGGAGGGAT--NNTCCTTGTCCTGGATCTTGGACTTC 44222 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | || | ||||||||| || | || Sbjct 44223 ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 44282 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 44283 TTGACGAAGATTTGCAT 44299 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || ||||| || || ||||| || || | || ||| || |||| Sbjct 43807 AAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTATAGTCGGAGAGGGTTCGACCGTC 43866 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||||||||| |||| | |||||||| || ||||| || || || || || Sbjct 43867 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTC 43926 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || | || || || | || | ||| Sbjct 43927 CTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGATGGT 43986 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 |||||||||||| || || |||| Sbjct 43987 CTTGCCGGTCAAGGTCTTGACGA 44009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641764657840