Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq58 86.0 6e-12
>seq58
Length=162708
Score = 86.0 bits (94), Expect = 6e-12
Identities = 132/186 (71%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || ||||||||||| ||||| ||||| ||| || |||| | || ||
Sbjct 43811 ACCAGGTGAAGGGTTGATTCCTTCTGGATGTTATAGTCGGAGAGGGTTCGACCGTCCTCG 43870
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || || || ||| | |||||||| ||||| || || || || || || || || ||
Sbjct 43871 AGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGG 43930
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || |||| || | || | |||||||| |||||||| || || || | || ||
Sbjct 43931 ATCTTGGACTTGA-CGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTT 43989
Query 45311 GCCGGT 45316
||||||
Sbjct 43990 GCCGGT 43995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000454080560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |