Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq394 228 1e-54 seq378 98.7 1e-15 seq395 91.5 2e-13 >seq394 Length=199350 Score = 228 bits (252), Expect = 1e-54 Identities = 458/678 (68%), Gaps = 6/678 (1%) Strand=Plus/Plus Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467 |||||| || || || ||||| | | |||||| || ||| | ||||||||||| Sbjct 55618 CTTATGCTTTCGCTTGAACTCGTTAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTC 55677 Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || || || | ||||| || |||||||| | |||||| | Sbjct 55678 ACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGT 55737 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | | || ||||| || ||||||||||| || || || ||||| ||||| || | Sbjct 55738 AAGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACC 55797 Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 || ||||| || |||||||| || || || || || || || || || || || || Sbjct 55798 CTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATTCG 55857 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 ||| ||| || || || || | ||||| || || || || || || || ||||| Sbjct 55858 GAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTGAGAGTCGTT 55917 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 |||||||| ||||| || || || |||| |||| ||| |||||| || || || || Sbjct 55918 GAAGTAGGCAGGGACGGTGACAACGGCGTTGTTGACAGTCTCACCGAGGTAAGACTCAGC 55977 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | || ||| ||||| || | ||| | || ||||| || | | || ||| | Sbjct 55978 AGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGGGTGAAGGTCTTCTT 56037 Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887 ||||| || || ||||| || || ||| || |||| | ||| | | | Sbjct 56038 CTCACCCTTGAACTCAACCTCGATGGCGGGCTT---GCCAGCCTTGTCGATGATTGTGAA 56094 Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947 | | | ||||||||| | ||||||| || | ||||| | ||||| | || Sbjct 56095 GGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGCGAACTTGCGGCCGATCAATCG 56154 Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007 ||| || || || || ||||| | |||||||||||| |||||||| || || || || Sbjct 56155 CTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACC 56214 Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067 || ||||| || | || || || ||||| | || ||||| ||||| || || || Sbjct 56215 AATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTTCGGTTACCCTG 56271 Query 8068 GTCGTTCGCAATAATTTC 8085 |||||| || || || || Sbjct 56272 GTCGTTGGCGATGATATC 56289 Score = 132 bits (146), Expect = 6e-26 Identities = 526/829 (63%), Gaps = 19/829 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || ||||| | || ||| || || || || || || Sbjct 54268 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTGAGCATGCGCTCGATCTCCTCCTTGGAC 54327 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || ||||| | ||| || || | |||| || | Sbjct 54328 AGGCGGCCCTTGTCGTTGGTGATGACGATCTTGTTGGACTTGCCGGTACCCTTCTCGACG 54387 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||| | |||||| | || | ||| || || | Sbjct 54388 GCGGAAACGTTCATGATACCGTTGGCATCGAGATCGAAGGTGACCTCAATCTGGGGAACA 54447 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | || ||||| || | || || | || | | |||| ||| | Sbjct 54448 CCACGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTG 54507 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | || || ||||| || ||||| | || || |||| || || || Sbjct 54508 GTGCGCTGGCGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGAAG 54567 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | ||||| || || || | || || | | |||| Sbjct 54568 GTAGAGAAGACCTCGGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGGATGAGCTTGGTC 54627 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| || |||| || ||||| ||||| | ||||| | ||| | | Sbjct 54628 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGAGGGGCAACGTCGAGGAGCAGAA-- 54685 Query 6989 TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACCG 7037 ||| | || || |||| |||| | | || || || ||||| | Sbjct 54686 TCTCG------TTGGTGGCCTTGCTAGAGGTGTCACCAGAGAGAATAGCAGCCTGGACAG 54739 Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097 || ||||| || || |||||||| ||||| || | || || | || || ||||| | Sbjct 54740 CGGCACCGTAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGA 54799 Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157 | || || | | | | || | ||||| || || ||||||||||| | |||| Sbjct 54800 AGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACGA 54859 Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217 | || | || || || |||||||| | ||| ||| ||||| || | | Sbjct 54860 TCTCGTGGACGAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGA 54919 Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277 | ||||| | ||| || || ||||| ||||| |||||||| ||||| || | Sbjct 54920 TGGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAAGTGT 54979 Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337 ||||||||| || ||| | | || || || ||||||| || || || | ||||| | Sbjct 54980 AGAAATCAATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAAGAAGAGA 55039 Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386 |||||||| ||||||||||| || ||||| | ||| ||||| ||||| Sbjct 55040 GAGTTCGCTTGGCGCGCTCACAAGCGGTTCGGAGACGTCGAAGAGCACG 55088 >seq378 Length=592700 Score = 98.7 bits (108), Expect = 1e-15 Identities = 170/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | ||| || || || ||||| || || || ||||| || Sbjct 584233 ATCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCGAGAACCTCGAAGATGCC 584292 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | || |||||||| || ||||||||||| || || | || | Sbjct 584293 ATCGTCAATGGAGAGCAGAGAAACATCGAAGGTACCACCACCGAGATCGTA---GACAAT 584349 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | || ||| | | |||||| || |||||||| |||||||| || || || || | Sbjct 584350 GATC-TGGCGCTCGCCATCGTTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTAGGCT 584408 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || | ||| || || ||| || || ||||| | | || || || || || |||| Sbjct 584409 CGTTGACAATTCGGAGGACGTTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGTC 584468 Query 7695 GTTG 7698 | || Sbjct 584469 GCTG 584472 >seq395 Length=1501135 Score = 91.5 bits (100), Expect = 2e-13 Identities = 226/339 (67%), Gaps = 12/339 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | || ||||| || ||| | ||||| || || | ||| Sbjct 810834 ATCGAAATCTTCACCACCGAGATGGGTATCACCGTTGGTGGACTTGACCTCGAAAACACC 810893 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || | | | || | ||| || ||||||||||| || || | | || Sbjct 810894 GTTCTGGATCTCAAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGAC 810953 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | || | || ||| ||||||||||| || | ||| || || || || || Sbjct 810954 AATGCTGTCAGCCTC------CTTCTCGAGACCGTAGGCAAGAGCGGCGGCAGTAGGCTC 811007 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCT-TG 7692 || | | ||| || ||| ||||| ||||| ||| | || || || || ||| || Sbjct 811008 GTTGACGACACGGAGGACGTTGAGGCCGGCAAT--TTGACCAGCGTCCTTGGT-GCTCTG 811064 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| || || ||||| |||||||| ||||| || ||||| |||| | ||| |||| Sbjct 811065 TCGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTTCTTGATAGGCTTAGA 811124 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 ||| |||| || ||| | || ||||| ||| | || || Sbjct 811125 GAGGTACGCCTCGGCGGTCTCCTTCATCTTGTTGAGGAC 811163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128941568240