Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31] 486 sequences; 36,567,111 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq389 212 7e-50 seq47 163 3e-35 seq380 86.0 7e-12 >seq389 Length=813516 Score = 212 bits (234), Expect = 7e-50 Identities = 1009/1588 (64%), Gaps = 49/1588 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 |||||||||||||| ||||| |||||| ||||| ||||| | | | | | | | Sbjct 462341 GACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAA----CCTGTCG 462286 Query 109567 CT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGAT 109622 || ||| ||||| ||||||||||||| | |||||| || | || |||| ||| Sbjct 462285 CTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGAT 462226 Query 109623 GTTTTGAATAGAGCC---ACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679 ||| || ||||| || | |||| | | || | | |||||| | | ||||| || Sbjct 462225 GTTCTGGATAGAACCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAG 462169 Query 109680 ACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAG 109739 ||| | | ||||| | | ||| |||||| || || || |||||||| Sbjct 462168 ACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAG 462109 Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799 || || |||||||||| | ||||| || || || || || |||||||| || || Sbjct 462108 GACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAAT 462049 Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGT 109859 || | || || || ||||| ||||| | ||| |||||||| |||| ||| | || Sbjct 462048 CTGCGAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGT 461989 Query 109860 CTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATC 109919 ||| || ||| || | | ||||| || || | || | || ||| Sbjct 461988 CTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG------GGCTTGACATT 461935 Query 109920 CCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGA 109979 |||||| || || || | |||||||| ||||| || |||||||| | ||| | Sbjct 461934 CCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGG 461875 Query 109980 CCCCTCAACCTCGGCCAACT---CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036 || || ||| ||| | | | || | || || || || || || || ||||| Sbjct 461874 ACCTTCCTCCTTGGCGAGTTGCACAGACGTAGTA---AGGGCAGCGTGGTAGATGGTCTC 461818 Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAAT 110096 || || || |||| |||| ||| | | || ||||| | | || Sbjct 461817 GAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAG 461758 Query 110097 AAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCG 110156 ||| |||| || ||||| || ||||| ||||||||||| || || |||||| | Sbjct 461757 AAAGGCATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTT 461698 Query 110157 TCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCAC 110216 ||||| || || ||||| |||| |||||||| | || | ||| || Sbjct 461697 ACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAAC 461638 Query 110217 AGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACAT 110275 | | |||| || || || || | | | ||| | | | ||| | || |||| | Sbjct 461637 AACTTGAGTGACCTCGTGCAGCTTCTTGAAGTCGTA-GCAAGCATCTTCATAGTTGATAA 461579 Query 110276 ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATT 110335 | ||| |||| | || ||||| ||||| |||| ||| || | || ||||| Sbjct 461578 AAGAGGGCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATT 461519 Query 110336 CCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATT 110395 | | || || || |||| |||||| || ||| ||| | |||||| || || | Sbjct 461518 CAATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCT 461459 Query 110396 TGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGA 110455 || ||||| |||||| ||||||||| | ||| | || || || ||||| | || | Sbjct 461458 TGCGATTGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAA 461399 Query 110456 GAATGGCCTTCCATACATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCCTC 110513 ||||||| | ||| | | || || || ||||| | | ||| || ||| Sbjct 461398 GAATGGCGTACCAAAGTTTCTGAGCCTTGATAGACTTGCG--ACCCTTACCCTCTCTCTC 461341 Query 110514 GTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT 110573 |||||| ||||| |||||||||| | ||||| |||| ||| || || || Sbjct 461340 GTACTTTTCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATT 461282 Query 110574 -GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAG 110632 || || || | ||| | ||| | || ||| || | ||||||||| || |||| Sbjct 461281 CGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAG 461222 Query 110633 GAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGC 110692 | ||||| | || |||| |||||||| || |||| || | ||| || || | Sbjct 461221 GGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTC 461162 Query 110693 GTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC 110752 | || || | || || | || || | |||||||||||| || |||| |||| || | Sbjct 461161 GGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAAGGCAC 461102 Query 110753 CCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806 | | | || ||| |||||| ||| || || || ||| ||||| || | | Sbjct 461101 C---AGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCA 461045 Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCAC 110866 |||| |||| || || | ||| |||||| ||||| || || | |||||| Sbjct 461044 GCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCAC 460985 Query 110867 GAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCT 110925 | || |||| | || ||||||||||| ||| ||| ||| |||| | ||| Sbjct 460984 GGATTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCT 460925 Query 110926 GTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAA 110985 |||| ||| | || ||||||||||| || |||| | ||| || ||||| || Sbjct 460924 -TGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAT 460866 Query 110986 GACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGA 111045 || | |||||| | || || || || ||||| | || || | |||||| ||| ||| Sbjct 460865 GAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGA 460808 Query 111046 CCTTG--GGACATCTTGTTGTATGTGTC 111071 |||| ||||| ||||||||| || Sbjct 460807 ACTTGCTTGACATGAGGTTGTATGTCTC 460780 >seq47 Length=1673914 Score = 163 bits (180), Expect = 3e-35 Identities = 321/464 (69%), Gaps = 22/464 (5%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| || || || || | ||||| | || || ||||| | ||||| ||| | Sbjct 248902 CGATCGAATCGTCCAGGTCGCATCAGAGCCTTGTCCAGCATATCCGCTCGGTTAGTACCA 248961 Query 11563 GCAATGACTACAATGCCAGT-CTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 |||| ||| || | || || ||| | ||| ||| || |||||||| || |||| ||||| Sbjct 248962 GCAAGGACGACCA--CCTGTTCTCGAGTGTTGAAGCCATCCATTTCCGTAAGAATCTGGT 249019 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTAC--- 11677 | | |||| |||||| || ||||| | | ||| | ||||| | ||| | | Sbjct 249020 TCAGCGTCGCTTCACGTTCGTCGTTACCGCCAAAACC-CTTGCCGCTCTCTTGTCGCGCG 249078 Query 11678 CGACA----GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 |||| || |||||||| ||||| || | ||| || || ||| ||| ||| Sbjct 249079 CGACCAATGGCATCAATCTCGTCGATAAAGATGATGCAAGGGGCGTTCTTACGGCCCTCG 249138 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 |||| || || ||||||||| | ||||||||| || |||||||||||||| | | Sbjct 249139 GCGAACAGATCTCGTACACGCGAAGGTCCAACACCGACAAACATCTCAACGAATTCGGAA 249198 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || |||||||| |||||| || ||||||||| || |||| || || | | Sbjct 249199 CCGC-TCACACTGAA-GAAGGGTACTCCAGACTCACCTGCCGTGGCCTTGGCAAGCAACG 249256 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---AC 11908 ||||||| ||||| || | ||||| | || || || || |||||||||||||| Sbjct 249257 TCTTACCAGTACCGGGGGGCCCAGCCAAAATAGCACCTCGTGGGATCTTGGCACCTAGCT 249316 Query 11909 TTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 || |||| | |||||||| ||| | |||| ||||| |||| Sbjct 249317 TTTCAAACT---TCTCAGGCTGCTTCAAGAAGCTCACAAACTCC 249357 >seq380 Length=646993 Score = 86.0 bits (94), Expect = 7e-12 Identities = 120/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || ||||| ||||| |||||||| ||| |||| || || Sbjct 392210 GGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACC 392269 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||| || | ||||| ||||| ||||||| | ||| || |||||||| Sbjct 392270 AGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGAT 392329 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG 119661 ||||| || || ||||| | ||||||| ||| ||||| ||| Sbjct 392330 ACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGC-GAAGGTAGAG 392375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972421970800