Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq406 107 2e-18
>seq406
Length=352714
Score = 107 bits (118), Expect = 2e-18
Identities = 263/394 (67%), Gaps = 5/394 (1%)
Strand=Plus/Minus
Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445
|||| || || |||| || | || || || || || || ||||| || || | ||||
Sbjct 31508 GAAAGGTTTGCCTGATCCCCGTTTCTGCCCACGGTACCAACCCTGCCTCGGCCGCTATGG 31449
Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGCAACATAGACATCAAAG 159502
| || ||||| || || ||||||||||| | | || ||| ||| | ||||| | |
Sbjct 31448 CTGGCATGAAGGTCGTCACCGTCAAGTGTGACGGCAAGACTGGTAACCTGGACATTGAGG 31389
Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATC 159562
|||| || || ||| | | | ||| || | ||| ||| |||| || |
Sbjct 31388 ATCTCAAGGCCAAGTGTGTCAAGCACGCTGATGAGCTCGCTGCTATCATGGTTACCTACC 31329
Query 159563 CATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGA 159622
| || || |||||| ||||| | | || | || | || | ||||||| |||
Sbjct 31328 CCTCCACCTTTGGTGTCTTTGAGCCCGAGATTAAGCAAGTCTGCGATCTTGTTCACGAGC 31269
Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682
| ||||||| || || | || ||||| || | || || ||| | ||||| |
Sbjct 31268 ACGGTGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATCGGTCTTTGCTCTC 31209
Query 159683 CATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCA 159741
| |||| ||| || || ||||| || ||||| ||| | || ||||| |||||||||||
Sbjct 31208 CTGGTGA-TATCGGCGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTATTCCC 31150
Query 159742 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775
|| || ||||| || ||||| || ||||||||||
Sbjct 31149 CACGGTGGTGGTGGCCCTGGTGTCGGTCCTATTG 31116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588047627588960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |