Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq389 214 2e-50
seq380 107 2e-18
>seq389
Length=813516
Score = 214 bits (236), Expect = 2e-50
Identities = 1043/1637 (64%), Gaps = 43/1637 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| | ||| ||||||| ||||| | || ||| || || || ||||| |||
Sbjct 460716 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGT 460775
Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
||||||||||||| || ||||| |||| | | ||| ||| |||| || || |
Sbjct 460776 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCAAGCCCCACTTTA 460833
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||| || ||||| ||| || ||| | || ||||||||| | | | ||||||
Sbjct 460834 TTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAG 460893
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | |||||||| | || || | | ||||| || || ||| ||||
Sbjct 460894 GACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCT 460953
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| |||||||| || || ||| | | |||| | ||| || || ||
Sbjct 460954 GGTGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACC 461013
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|||||| || | ||||| |||| ||||| || || || ||| ||| || || ||
Sbjct 461014 AATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTAC 461073
Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGG 75622
|| | || ||| || |||| | || || |||| ||||| | |||||||||
Sbjct 461074 GTTGACCA---GGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAACCATGG 461130
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| ||||| || | ||||||||||| | ||| || || ||| | || |||| ||
Sbjct 461131 CACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGC 461190
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| | || || || | | | || ||||| || || |||||||||||||| || |||
Sbjct 461191 GCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGA 461250
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
|| ||||| |||| | || || || || || || || || | ||| ||
Sbjct 461251 AACGGCGAATGGACTCTCATGTGCCCTAACGAATGC-CCTGGCCTTGCTGACTGCTACGG 461309
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGT-AGAGCCAATGCGACT 75859
||| || ||||| || || ||| |||||| || ||| |||||| || | | || | |
Sbjct 461310 TGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGA-GAGGGTAAGGGTC---GCAAGT 461365
Query 75860 GTA-CCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917
|| | || | | | | ||||| | || ||||| | | ||||| ||||| |||| |
Sbjct 461366 CTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACC 461425
Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977
| | ||||| ||||||||| || || ||||||||||||||||| | || || |
Sbjct 461426 CTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTACCA 461485
Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037
|| ||||| || || ||||| || || | || ||| | |||||| ||||
Sbjct 461486 TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTG 461545
Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTT 76094
||||||| | || || | | || || | | ||| ||||||| || || |
Sbjct 461546 TTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTTATCAACTATGAAGATGCTTGC---T 461602
Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
|| | | || || || || |||| | ||||| | ||| | ||| |||
Sbjct 461603 ACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCA 461662
Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214
| ||| || || || || | || || || || ||||| ||| |||| |
Sbjct 461663 TCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 461722
Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274
||||| | ||||| ||||||||||| |||| ||| || |||| | ||||| |
Sbjct 461723 TTGGTCTTGGTGTGCAAGGTCTCGCTGATGCCTTTCTTGCCCTCCGCATGCCCTTTGAGT 461782
Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334
| ||| || ||| |||| | ||||| || ||||| || ||||| ||||
Sbjct 461783 CTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTA 461842
Query 76335 AGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393
|| |||| || | || | | ||||| |||| || || |||| || ||
Sbjct 461843 CTACG-TCTGTGCAACTCGCCAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCT 461901
Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACG 76451
|| || | || | || ||||| || |||| |||| || || || || | | | |
Sbjct 461902 GCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTCAAGCC-CTCTGACCTTTGGG 461959
Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511
||||||| ||| || ||||| | ||| | || |||||||| | | |
Sbjct 461960 ACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 462019
Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571
| || ||||| || ||| ||| | || || | || || || ||||||||||| || |
Sbjct 462020 CTCCTATGCCTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTT 462079
Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631
|||| | |||||||||| | || ||| || || ||||| ||||||||
Sbjct 462080 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCT 462139
Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA--- 76688
|| |||| || || | || ||||| |||||| | | ||||||| | | ||
Sbjct 462140 GGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCA 462199
Query 76689 -TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747
|| ||| | | ||||| || || || ||| | | ||||| | || |||||| |
Sbjct 462200 TTGCTGATAAC----GGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCT 462255
Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807
|| ||| || |||||||| || | | | || | | ||||| || || |||
Sbjct 462256 CTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTGCTGACCGT 462315
Query 76808 GGTCGCTTCATTGATCA 76824
||| ||||||||||||
Sbjct 462316 GGTGCCTTCATTGATCA 462332
>seq380
Length=646993
Score = 107 bits (118), Expect = 2e-18
Identities = 305/460 (66%), Gaps = 24/460 (5%)
Strand=Plus/Minus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
||||||| |||| ||| |||| ||||| || ||||||||||||||| ||| | |
Sbjct 392370 CCTTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCT 392311
Query 65129 TCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187
| ||| | || | ||| | |||||||| || |||||||| || || |||| || ||
Sbjct 392310 T-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAAC 392252
Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247
|| || ||||| || ||||||||||| ||| || |||||| || ||| || | ||
Sbjct 392251 GAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCC-TG--TCTCCTCCACTCT 392195
Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304
| || ||| ||| | | | ||||| | ||| | | || || |||
Sbjct 392194 CACCTCAAGGGACGTGCCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCT 392135
Query 65305 ATTGAGAAAGGGTTCATCTT--GGACGCACTCCCATGTAATCTCATCGGTATGAACTCTG 65362
|||||| | | ||| |||| || || ||||| ||| || |||| ||||||||
Sbjct 392134 ATTGAGCAGGAGTT--TCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCA 392077
Query 65363 AGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-G 65421
| ||| ||||||| || | || | |||||||||||| |||| | |
Sbjct 392076 ACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTC------GTTGCTCTCG 392023
Query 65422 CCACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTG 65476
|| | | | | || | | || || || ||||| ||||| ||||| |||||
Sbjct 392022 GCAACGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTG 391963
Query 65477 ATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|| |||||||||||||| |||||||| |||| |||||
Sbjct 391962 GCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCTGACTA 391923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565975839680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |