Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq380 170 6e-37
seq389 123 7e-23
seq245 118 3e-21
seq404 116 1e-20
>seq380
Length=646993
Score = 170 bits (188), Expect = 6e-37
Identities = 263/370 (71%), Gaps = 4/370 (1%)
Strand=Plus/Minus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| || || ||| ||||| | ||||| |||||| || ||||| || ||||
Sbjct 392562 CCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACAT 392503
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423
| || || || ||||| |||||||| || | | |||| | ||| || | ||||||
Sbjct 392502 ACTCCCTCCTCATCGATACCTACATCAAGGACCCTGCCCAGC-GTACATACCTCTTCAAC 392444
Query 133424 GCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483
||| || | ||||||| || |||||| | || ||||| || ||||||||||
Sbjct 392443 GCCGTTGACACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAG 392384
Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543
|| ||| | | || ||| ||||| ||||||||||||| || ||||| || ||
Sbjct 392383 GATAAGAACTCTACCTTCGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTC 392324
Query 133544 ttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602
||||| ||||| || |||| | || || ||||| || |||||||| | | ||||| ||
Sbjct 392323 TTCAGCGGTGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT 392265
Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTT 133662
| | ||||||||||| || ||||| | || |||| ||||||||||| |||||| | |
Sbjct 392264 GAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGTCT 392205
Query 133663 ACTTCACTCT 133672
|| ||||||
Sbjct 392204 CCTCCACTCT 392195
>seq389
Length=813516
Score = 123 bits (136), Expect = 7e-23
Identities = 544/853 (64%), Gaps = 11/853 (1%)
Strand=Plus/Minus
Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685
||| |||||| | |||||| ||||||||| || || |||||| || | ||||| |
Sbjct 461527 CGCAGTATTCAATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTT 461468
Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745
||||| || | || || ||||||||| || ||| | ||| |||| ||||| |||
Sbjct 461467 GGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCT 461408
Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTT 155805
| || || ||||| ||| || | | || || || |||| | || |
Sbjct 461407 GGGCCTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTGATAGACTTGCGACCCTTACCCT 461348
Query 155806 CCGACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCC 155863
| ||| || |||| || | ||| | | || |||||||| || ||| || ||
Sbjct 461347 CTCTCTCGTACTTTTCGTACAGAGCCTCAAAT--TCGTCACCGTAGCAGTCAGCAAGGCC 461290
Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAA 155923
|||||| | | ||||| | || | ||| || | ||||||| ||| ||
Sbjct 461289 AGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAA 461230
Query 155924 TACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTG 155983
| |||| ||||| ||| |||| ||||| | || |||||| | |||||
Sbjct 461229 AAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTG 461170
Query 155984 ATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGC 156043
|||||| || || || | ||| || | || | || ||| || || || || ||
Sbjct 461169 ATTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGC 461110
Query 156044 AAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGAC 156100
|| |||| | |||| |||||||| || || || |||||||| || ||||| ||
Sbjct 461109 GAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACAC 461050
Query 156101 ACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGA 156160
|| ||||| |||| ||||| |||||||| |||||||| ||| || | || ||||
Sbjct 461049 ACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGT 460990
Query 156161 TGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGC 156219
| || | || | | ||||||||||| | |||| || ||||| || |
Sbjct 460989 GGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAG-CCATCTTGGAAATCATGGCAC 460931
Query 156220 ATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGC 156279
| ||| | |||| | | ||||| ||||| || || | ||| | || |||
Sbjct 460930 AAGTCTTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGC 460871
Query 156280 ACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAA 156339
| || | ||||| |||| || || |||||||||| || || |||||||| | |
Sbjct 460870 ATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA 460811
Query 156340 AATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGAT-TAGACCCGTGA 156398
| |||| | ||||| | |||||||||| | ||||| || |||| ||
Sbjct 460810 AGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGA 460751
Query 156399 ATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATT 156458
| || | || ||| | ||| ||||||||| || ||||| |||| || |||||
Sbjct 460750 TTCCA-ACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATC 460692
Query 156459 CGCAGAAGGTATG 156471
| || | |||||
Sbjct 460691 TGTAGCAAGTATG 460679
>seq245
Length=844975
Score = 118 bits (130), Expect = 3e-21
Identities = 382/587 (65%), Gaps = 12/587 (2%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | | || || ||||| | | ||||||| || | ||| |||| ||
Sbjct 617333 ATGAGTCCACAAATTTCGCAAACGTGGACTCGGAAAGCATCCGACACCTCAAATAGACGC 617274
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| |||| || |||||||| | |||||| |||||||||||||| || |||||
Sbjct 617273 TCCTTCAGGAAGGCAGCAGCACCGTGAGCAATCATGCAATCACGCTCCATCTCTCCGAAT 617214
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586
|| || |||||||| || || | ||||||| ||||||| || || | | | | |||
Sbjct 617213 CGCAGGCCACCATCTCGGGCACGACCCTCGACAGGCTGCCGGGTCATAATCTGAACGGGA 617154
Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646
|| || || || ||| |||| ||||| || ||||| |||||| |||
Sbjct 617153 CCACGGGCACGAGCGTGGATCTTGTCATCCACCATGTGACGAAGACGTTGGTAGTATGTA 617094
Query 251647 GGACCGATGAAGATGCTCGA--AGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTT 251704
|| |||| ||||| || || | | | | ||| || || | || ||||| || |
Sbjct 617093 GGTCCGAAGAAGA--CTTGAGCACGGAGCTTACGTCCGGTGTGACCATTGTACATGACCT 617036
Query 251705 CGTTTCCATTAGATTCATAACCAAGTT---TCTGTAGCTCTGAAGCAATATCACCAATCT 251761
| || ||||| ||||| ||| || | | ||||| | | | |
Sbjct 617035 CAAAACCTCGAGATTGGTAACCGTGTTTTCTCAGAATATCTGACACGGAGT---CGACGG 616979
Query 251762 TGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTA 251821
||| | | || || |||| || | | |||| | | | || || | |
Sbjct 616978 TGACATCAGTGAATGGCGTTGCGTCACCCTCCATACCCTCCAGTGTTGAGACCTTACTCA 616919
Query 251822 AAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGA 251881
|||| ||| ||| ||||| || ||||||||| |||||||| || || |||||||
Sbjct 616918 AAAGACACTCAATCAAATGGGCAATTGTCATACGAGACGGAATAGCGTGAGGGTTGATGA 616859
Query 251882 TGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTT 251940
| ||||| || |||| || || |||| |||||||||| | || ||| |
Sbjct 616858 TAATGTCAGGAGTCAGACCCTCTCTGCTGAAAGGCATATCCTCCT-GTCGATAGGTAACA 616800
Query 251941 CCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|| || || |||||||| ||||||||||| |||||| ||||||||
Sbjct 616799 CCGATTGTACCCTTTTGACCGTGACGAGAGGCGAACTTGTCACCAAT 616753
>seq404
Length=240026
Score = 116 bits (128), Expect = 1e-20
Identities = 204/297 (69%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 302568 AATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTAC 302627
|| |||||| | | ||||| || || |||||||| ||||||||| || || || ||
Sbjct 130217 AAGGTCTTCAAGAGCCTTGACCAATCGTCGCTGAATGTAACCAGTTTCAGCAGTCTTGAC 130158
Query 302628 AGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687
|| |||||||| ||||| | |||||| |||| || |||||||| | ||| ||
Sbjct 130157 CGCAGTATCAATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAAAACTCGCTAGGGGT 130098
Query 302688 TAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTT 302747
|| || | | | ||| |||| ||||||||||| || ||||| |||| || |||
Sbjct 130097 AAGACCACGTAGGTAAGAGTTCTCGACGAAACCACGGGCTTCGGGAGAATAATCATCCTT 130038
Query 302748 GGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTT 302807
||| || || ||||| || | | || | || | || || |||||||| || ||| |
Sbjct 130037 GGTGAAATGAGGCAGAGTACGATACTTGAAACCAAAGGGAATGCGCTTTCCTTCGACGAT 129978
Query 302808 CTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864
|| || || | || | |||| |||||||| || | | | |||||||| ||
Sbjct 129977 TTGTTGACCGACAAGCGCAGTCATTTGCGAAATGTTGATAGAAGAACCCTTGGAACC 129921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471808435175782
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