Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq389 179 4e-40
seq85 122 8e-23
seq58 111 2e-19
seq323 107 2e-18
>seq389
Length=813516
Score = 179 bits (198), Expect = 4e-40
Identities = 1117/1762 (63%), Gaps = 69/1762 (4%)
Strand=Plus/Minus
Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109
||||| ||| |||||||| || ||||||||||| ||||| | ||| ||||||
Sbjct 462341 GACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGA 462282
Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169
|||||||| | ||||||||||| |||||| | | || ||| | ||||
Sbjct 462281 GAA---ATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATG 462225
Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229
||| | || ||| | |||| || | || ||| | || | | ||
Sbjct 462224 TTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCC 462165
Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289
| |||| || || | || || | | || || ||||| |||||||| || || ||
Sbjct 462164 ATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACT 462105
Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349
|| || | || | |||| || | || ||||| | ||||||||||| | |||||||
Sbjct 462104 CGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGC 462045
Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409
| ||| | || || ||||| || || ||||| |||||| | |||| || | ||
Sbjct 462044 GAGGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTG 461985
Query 148410 ATTTTGCGCTTCAGAGCCG--CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGT 148467
| | | || ||| | |||||||||| || || || | || ||||||||||
Sbjct 461984 ACAT--CCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGT 461927
Query 148468 CGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527
|| |||| ||||| || || ||| ||||| | | | | ||| || || | |
Sbjct 461926 CGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCT 461867
Query 148528 CCGCCGCCAGTT-CGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586
|| || |||| | ||| || || || ||| ||| || |||||| ||||||
Sbjct 461866 CCTTGGCGAGTTGCACAG-ACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGC 461808
Query 148587 CTGTTGAGC---AGCGCCGC-CGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGC 148642
|||| ||| | ||| | || | || | ||||| || || | ||| ||
Sbjct 461807 TTGTTCAGCTCACGAGCCTCAGGAGAC----TCAAAGGGCATGCGGAGGGCAAGAAAGGC 461752
Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702
|| || || || || || || | |||||||| ||||| |||||| | || ||
Sbjct 461751 ATCAGCGAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC 461692
Query 148703 GCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCT 148761
||| | || || ||||||||| |||||||||||||| | |||||| || || || |
Sbjct 461691 -CTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTT 461633
Query 148762 TTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTAC------GATGCATCGGT 148815
|| | | ||||| | || ||||| ||||| | ||| | |
Sbjct 461632 GAGTGACCTCGTGCAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATAAAAGAGG 461573
Query 148816 TCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGA 148875
|| | | ||||| || ||||| || || |||||| ||||||| ||| || | ||
Sbjct 461572 GCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGA 461513
Query 148876 TCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGT 148935
|||| | |||||| ||| || | ||| || | ||||||||| || ||||||| |
Sbjct 461512 TCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGAT 461453
Query 148936 TGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT-- 148993
|||| |||||||| |||||| | || || || || ||| | || | ||
Sbjct 461452 TGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGG 461393
Query 148994 -GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT---CCT---GCT 149046
| ||| | || | ||| || |||| | | | |||||||| ||| ||
Sbjct 461392 CGTACCAA---AGTTTCTGAGC-----CTTGATAGAC-TTGCGACCCTTACCCTCTCTCT 461342
Query 149047 CGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCA 149104
|||| | ||| | ||| ||| || | || |||||||| || | || || |||||
Sbjct 461341 CGTACTTTTCGTACAGAGC--CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCA 461284
Query 149105 CTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATC 149164
| || ||||||||||| | ||| |||||| | || |||||||| || |||||
Sbjct 461283 TTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATC 461224
Query 149165 GGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC--GCCCATG-TT 149221
|| | ||| || || | | ||||| || || || | | || | || || ||
Sbjct 461223 AGGGATCCAAAGAGCTAAGAACAGGTCACGAGC---GCGGACCTCCTCCTTACCGTGATT 461167
Query 149222 GCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAG 149281
|| || | || | ||| | ||| |||||||| || |||| ||| | ||||
Sbjct 461166 CTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGTTCAAGGTAGATGGCGAA 461107
Query 149282 CGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCG 149338
|| || |||||| || |||||||| |||| || | ||||||| ||||| ||
Sbjct 461106 GGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACG 461047
Query 149339 AACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGC 149398
| ||| || | || || ||| ||| || || ||| | ||| | ||| ||
Sbjct 461046 CAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGC 460987
Query 149399 TCGCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AG 149456
|| | | ||| |||| | ||| || || || ||| | ||| || || || | ||
Sbjct 460986 ACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGCCAT-CTTGGAAATCATGGCACAAG 460928
Query 149457 TCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGC-AGAAAGCA 149515
|| ||| || |||||| || || |||||||| |||||| ||| | || |||||
Sbjct 460927 TC-TTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCAT-ATCAACAAGGAAGCA 460870
Query 149516 CGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AA 149574
|| | | || || | || ||||| ||| | |||||||| || || || ||
Sbjct 460869 TGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAA 460810
Query 149575 AATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGA 149634
| || || | ||| | | ||| | ||| | || || || || || || || ||
Sbjct 460809 GAACTTGCTTG-ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGA 460751
Query 149635 TGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTT 149694
| || | ||||| ||||| | |||||||||||| ||||| || | |||| |||| |
Sbjct 460750 TTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCT 460691
Query 149695 TGAGCAAGTA-GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGG 149753
|||||||| | | | || || | ||||||| || ||||||| ||||||||
Sbjct 460690 GTAGCAAGTATGATCTGGACAAG-GTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGA 460632
Query 149754 CCGTGGTCAATGGCGGCGTCGA 149775
| | | |||| || | |||||
Sbjct 460631 TCATAGACAATCGCTGAGTCGA 460610
>seq85
Length=135120
Score = 122 bits (134), Expect = 8e-23
Identities = 158/215 (73%), Gaps = 9/215 (4%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||| ||||| || ||||| |||| || ||| | | | ||||||||
Sbjct 93976 AAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAG 94034
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC--GG-- 133569
|||||| || || | || || ||||||||||| || ||||| || |||||||| ||
Sbjct 94035 CTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGAT 94094
Query 133570 ---TGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGG 133626
|||||| ||||| | |||| ||||||| | |||||| || | ||||| |
Sbjct 94095 NNTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCG 94154
Query 133627 TTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661
| || || || || || || |||||||||||||||
Sbjct 94155 TCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATG 94189
>seq58
Length=162708
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||||||| | ||| | | | |||||||||||||||||
Sbjct 44105 GTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 44163
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | |||||||| || |||||||| |||||||| |||||| |||
Sbjct 44164 GGCGAAAATCAATCGCTGCTGATCAGGAGGGAT--NNTCCTTGTCCTGGATCTTGGACTT 44221
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| | ||| || |||| ||||| ||| ||||| || || ||
Sbjct 44222 CACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGT 44281
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| || |||||
Sbjct 44282 CTTGACGAAGATTTGCAT 44299
Score = 105 bits (116), Expect = 6e-18
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||||||||||||||| ||| |||| | |||||||| || |||||||| || |||||
Sbjct 43864 GTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTT 43923
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||||| | || | ||||||| | ||| || || | |||||
Sbjct 43924 GTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTGAT 43983
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGA 133650
||| |||||||||| || || ||||
Sbjct 43984 GGTCTTGCCGGTCAAGGTCTTGACGA 44009
>seq323
Length=1534178
Score = 107 bits (118), Expect = 2e-18
Identities = 119/158 (75%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||||||||||||||| ||| | || | |||||||| || || |||||||| ||||||
Sbjct 1260260 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTG 1260201
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | | ||| || |||| ||||| |
Sbjct 1260200 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATG 1260141
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGC 133663
|| ||||| ||||| || || |||||| ||| |||||
Sbjct 1260140 GTCTTGCCCGTCAGGGTCTTCACGAAA--CTGGATGGC 1260105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417863218640
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