Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966645.1_202015-03-31]
486 sequences; 36,567,111 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq58 91.5 1e-13
>seq58
Length=162708
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||| ||| || || ||||||||||||||||| ||||| | || || | ||
Sbjct 44099 TGGAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGGGTGCGGCCATCCTCGAGCTGC 44158
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| ||||| |||||||| ||||||||||| | || | || ||||| || ||
Sbjct 44159 TTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGG--GATNNTCCTTGTCCTGGATCTTG 44216
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
||| |||| ||| | ||||||| ||| || || || | ||||| || || |||||
Sbjct 44217 GACTTC-ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGT 44275
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| || || || ||||| ||||||
Sbjct 44276 GAGGGTCTTGACGAAGATTTGCATA 44300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702053045120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |